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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:03:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus genome assembly, chromosome: A07.
HG994361.1:3257634-3257653
AGTTTGTTATAACAAGCTGGTGAGATGGCG3257634TCATCACTATCACGGAAACATAGAGAGAATCCAATCCAGTTACAGAGAAG
Brassica rapa genome, scaffold: A07.
LR031574.1:3159503-3159522
AGTTTGTTATAACAAGCTGGTGAGATGGCG3159503TCATCACTATCACGGAAACATAGAGAGAATCCAATCCAGTTACAGAGAAG
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:3202001-3202020
AGTTTGTTATAACAAGCTGGTGAGATGGCG3202001TCATCACTATCACGGAAACATAGAGAGAATCCAATCCAGTTACAGAGAAG
Dicrocoelium dendriticum genome assembly, chromosome: 1.
OX104063.1:100966414-100966433
AACTTCGACATGCGTCAACAGCTTGGGACC100966414TCATCACTATCACGGAAACATGGTTTGGCTGTGAGATAACCGATGCCGAA
Peromyscus eremicus genome assembly, chromosome: 20.
OX460414.1:55021694-55021713
GTAGTGAATTTCATGTCACTTACAACTTTG55021694TGTTTCCGTGATAGTGATGAAGAGACTCCTGAAGACTCTCCACTGAGTTG
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:33395767-33395786
CTTCTCTGTAACTGGATTGGATTCTCTCTA33395767TGTTTCCGTGATAGTGATGACGCCATCTCACCAGCTTGTTATAACAAACT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR824636.1:209702359-209702378
TGACCGATTACATAATGGTGGCCTTCCACA209702359TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828119.1:206095275-206095294
TGACCGATTACATAATGGTGGCCTTCCACA206095275TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828150.2:204036323-204036342
TGACCGATTACATAATGGTGGCCTTCCACA204036323TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
LR828270.1:202797147-202797166
TGACCGATTACATAATGGTGGCCTTCCACA202797147TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459906.1:210469775-210469794
TGACCGATTACATAATGGTGGCCTTCCACA210469775TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX459981.1:208276274-208276293
TGACCGATTACATAATGGTGGCCTTCCACA208276274TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460099.1:205738303-205738322
TGACCGATTACATAATGGTGGCCTTCCACA205738303TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare genome assembly, chromosome: 5H.
OX460233.1:201593069-201593088
TGACCGATTACATAATGGTGGCCTTCCACA201593069TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 5H.
OX638795.1:206335327-206335346
TGACCGATTACATAATGGTGGCCTTCCACA206335327TGTTTCCGTGATAGTGATGATGATGATGCATTTATTGATGATAGTGATGA
Dicrocoelium dendriticum genome assembly, scaffold: DDEL_scaffold0022813.
LK416590.1:1319-1338
NNNNNNNNNNNNNNNCTCACAGCGCAACCA1319TGTTTCCGTGATAGTGATGACGTCCCAAGCTGCTGATGCGTGTCGAAGTC
Dicrocoelium dendriticum genome assembly, chromosome: 12.
OX104061.1:10056185-10056204
TTCGGCAGCCGTTATCTCCCAGCGCAACCA10056185TGTTTCCGTGATAGTGATGAGGTCCCAAGCTGCTGACGCGTGTCGAAGTG
Dicrocoelium dendriticum genome assembly, chromosome: 1.
OX104063.1:99120077-99120096
TTCGGCATCCGTTATCTTACAGCGCAACCA99120077TGTTTCCGTGATAGTGATGAGGTCCCAAGCTTCTGACGTGTGTCGAAGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCACTATCACGGAAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCACTATCACGGAAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.367 | 0.358 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCACTATCACGGAAACA&k=0&no_gap=0&offset=0&limit=50
0.485 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTTCCGTGATAGTGATGA&k=0&no_gap=0&offset=0&limit=46
0.495 | 0.009 | cgi_end;

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