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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 02:39:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CCZA16428.b1 CCZA Tetranychus urticae London larvae normalized Tetranychus urticae cDNA clone CCZA16428 5', mRNA sequence.
GW034317.1:545-564
TCATCGTCATCATCTTCTTCTTCATCATCA545TCATCAGCAGCTCCAACAACAACAACTACTACAGCAGCAGCAACAGAAAC
Eupeodes latifasciatus genome assembly, chromosome: 1.
OV049924.1:233132776-233132795
ACAATATCAACAACAAAGGCAGCGAAGACA233132776TCATCAGCAGCTCCAACAACAACAACAAGAACAACATCCACAACAACAAC
Eupeodes latifasciatus genome assembly, chromosome: X.
OV049927.1:32275625-32275644
ACAATATCAACAACAAAGGCAGCGAAGACA32275625TCATCAGCAGCTCCAACAACAACAACAAGAACAACATCCACAACAACAAC
Raja brachyura genome assembly, chromosome: 1.
OY740781.1:47885729-47885748
GCTTCTTCTGCAATAATGGTGGCTGCTGAA47885729GTTGTTGGAGCTGCTGATGATAAAGACGCAAGTGGTTTTCCCGTTCCTTT
Dianthus caryophyllus mRNA, clone: CES05G19, 5' end sequence.
FY384144.1:343-362
GATCAACAAGGTGTCGGTATTAAGGATAAG343GTTGTTGGAGCTGCTGATGACACAAAGACTAGCGCGACTGAACAAGGTGT
Dianthus caryophyllus mRNA, clone: CES05G19, 5' end sequence.
FY384144.1:409-428
ACTGAACAAGGTGTTATTGTTAAGGATAGG409GTTGTTGGAGCTGCTGATGACATTAAGACTAAGGTTGTCGGAGGTGCTGA
Astragalus glycyphyllos genome assembly, chromosome: 1.
OY754307.1:19171265-19171284
TATCAGTGTTTGTGTTGAACTGTTGTTGGG19171265GTTGTTGGAGCTGCTGATGAGGTTGCTGGAGTTTTATTAGAGAAAACTGA
Atethmia centrago genome assembly, chromosome: 7.
HG995373.1:21043718-21043737
TTTGTTTTAGAATTATCAAAGCATCAAGTA21043718GTTGTTGGAGCTGCTGATGATGTCAAAAACTATATATGCATCTTTGCAAA
Eupeodes latifasciatus genome assembly, chromosome: 1.
OV049924.1:286042782-286042801
GTTGTTGTTGTGGATGTTGTTCTTGTTGTT286042782GTTGTTGGAGCTGCTGATGATGTATTCGCTGCCTTTGTTGTTGGTGTTGT
Polymixis lichenea genome assembly, chromosome: 7.
OX420938.1:20004696-20004715
GGTAGCTTAAACTAAATTGCATTTGAAAAC20004696GTTGTTGGAGCTGCTGATGACTGCAAAAGCTTATCTTTGCATTGTATAAA
Polymixis lichenea genome assembly, chromosome: 29.
OX420960.1:3046944-3046963
CTTAAACCAAATTGAATAGCATTTGAAAAC3046944GTTGTTGGAGCTGCTGATGAAGACTGTAAAAGACTAGATATCTTTGCATT
Eristalinus aeneus genome assembly, chromosome: 6.
OY019135.1:5683174-5683193
GTCCCCGTCGTTGGCAATAGCGATACCAAG5683174GTTGTTGGAGCTGCTGATGAAAATATTTTATCATGTGCATCTGGTGTTGT
Xanthia togata genome assembly, chromosome: 19.
OY970807.1:25207133-25207152
ACATAAACTAATTGATTAGCATTCGAAAAT25207133GTTGTTGGAGCTGCTGATGATTGCAAAAACTATCTTTGAATTGTATAACT
Xanthia togata genome assembly, chromosome: 29.
OY970817.1:10799248-10799267
TCGTTTCTTTGGTCTTCCTCTACTCTTATA10799248GTTGTTGGAGCTGCTGATGATTGAAAAACTATATTTAGAATCGTATACAT
Xestobium rufovillosum genome assembly, chromosome: 6.
OZ014497.1:2085138-2085157
GCAGAAGGGCAGAAGCTGGTAGGGGTCCTT2085138GTTGTTGGAGCTGCTGATGAGCTCCGATCCATTGTATCGTCGTTCGTTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCAGCAGCTCCAACAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCAGCAGCTCCAACAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.483 | 0.474 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCAGCAGCTCCAACAAC&k=0&no_gap=0&offset=0&limit=50
0.762 | 0.279 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTTGGAGCTGCTGATGA&k=0&no_gap=0&offset=0&limit=47
0.770 | 0.008 | cgi_end;

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