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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 14:50:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

VVB188E06_429875 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB188E06 5, mRNA sequence.
CD713304.1:283-303
AAAAAAGATATAATGTCATCTTCAGCGTCA283TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
VVB205E04_432961 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB205E04 5, mRNA sequence.
CD714847.1:283-303
AAAAAAGATATAATGTCATCTTCAGCGTCA283TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
VVB165E12_411561 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB165E12 5, mRNA sequence.
CD719827.1:283-303
AAAAAAGATATAATGTCATCTTCAGCGTCA283TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
VVB169B01_412211 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB169B01 5, mRNA sequence.
CD720152.1:283-303
AAAAAAGATATAATGTCATCTTCAGCGTCA283TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
VVB169C01_412233 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB169C01 5, mRNA sequence.
CD720163.1:283-303
AAAAAAGATATAATGTCATCTTCAGCGTCA283TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
CAbud0006_IIIR_G12 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IIIR_G12 3', mRNA sequence.
CF513380.1:71-91
AAAAAAGATATAATGTCATCTTCAGCGTCA71TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
Vitis vinifera contig VV78X011738.6, whole genome shotgun sequence.
AM486261.2:11140-11160
AAAAAAGATATAATGTCATCTTCAGCGTCA11140TCATCATGATAATCATTCAACAATCAATAGTAATAAATTTTTGTTCTTTAA
Lotus japonicus genomic DNA, chromosome 6, clone: LjT17C05, TM0014.
AP004482.1:14969-14989
AAGAACAAAATCAATCACAAAAAGACATCA14969TCATCATGATAATCATTCAACAAAAACGTTCCAACACACGTAAAATCCATG
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:9972127-9972147
AAGAACAAAATCAATCACAAAAAGACATCA9972127TCATCATGATAATCATTCAACAAAAACGTTCCAACACACGTAAAATCCATG
Rhinatrema bivittatum genome assembly, chromosome: 3.
LR584389.1:343896383-343896403
AAAGTTTTTAGAAAGATGGGTTCTTTTCCA343896383GTTGAATGATTATCATGATGAACATTCTGTGTTGGCCCTTGGAGCAATATA
Sequence 8080 from patent US 7960612.
GY266127.1:751-771
TTAAAGAACAAAAATTTATTACTATTGATT751GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
Sequence 12032 from patent US 8030546.
GY464257.1:751-771
TTAAAGAACAAAAATTTATTACTATTGATT751GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
Sequence 12032 from patent US 10597667.
MO975410.1:751-771
TTAAAGAACAAAAATTTATTACTATTGATT751GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
CAbud0006_IIIF_G12 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IIIF_G12 5', mRNA sequence.
CF514374.1:751-771
TTAAAGAACAAAAATTTATTACTATTGATT751GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
Vitis rotundifolia cultivar Noble chromosome 5.
CP092930.1:2434568-2434588
TTAAAGAACGAAAATTTATTACTATTGATT2434568GTTGAATGATTATCATGATGATGACGTTGAAGATGACATTATATCTTTTTT
Vitis vinifera cultivar Pinot Noir 40024 chromosome 5.
CP126652.1:3416394-3416414
TTAAAGAACAAAAATTTATTACTATTGATT3416394GTTGAATGATTATCATGATGACGACGCTGAAGATGACATTATATCTTTTTT
Vitis x doaniana cultivar PI 588149 chromosome 5.
CP128331.1:2680982-2681002
TTAAAGAACAAAAATTTATTACTATTGATT2680982GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
Vitis x doaniana cultivar PI 588149 chromosome 5.
CP128350.1:2739584-2739604
TTAAAGAACAAAAATTTATTACTATTGATT2739584GTTGAATGATTATCATGATGATGACGCTGAAGATGACATTATATCTTTTTT
Vitis vinifera cv. PN40024, annotated scaffold_20.assembly12x.
FN595749.1:1292601-1292621
TTAAAGAACAAAAATTTATTACTATTGATT1292601GTTGAATGATTATCATGATGACGACGCTGAAGATGACATTATATCTTTTTT
L.japonicus gln1, pge1 & krm genes.
Y12859.1:10509-10529
CATGGATTTTACGTGTGTTGGAACGTTTTT10509GTTGAATGATTATCATGATGATGATGTCTTTTTGTGATTGATTTTGTTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCATGATAATCATTCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCATGATAATCATTCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.499 | 0.490 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCATGATAATCATTCAAC&k=0&no_gap=0&offset=0&limit=50
0.746 | 0.247 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGAATGATTATCATGATGA&k=0&no_gap=0&offset=0&limit=41
0.753 | 0.007 | cgi_end;

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