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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-20 08:02:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:16122069-16122091
ACATTCCCATCATGATCATCATCTCTGAAT16122069TCATCCAAGTTTGACCGTTTTCTTTTCTTTATATCATTCTTTGACCTGCACAA
Medicago truncatula chromosome 7 BAC clone mth2-58i19, complete sequence.
AC186135.3:35935-35957
TTGTGCAGGTCAAAGAATGATATAAAGAAA35935AGAAAACGGTCAAACTTGGATGAATTCAGAGATGATGATCATGATGGGAATGT
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:43712694-43712716
TTGTGCAGGTCAAAGAATGATATAAAGAAA43712694AGAAAACGGTCAAACTTGGATGAATTCAGAGATGATGATCATGATGGGAATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCCAAGTTTGACCGTTTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCCAAGTTTGACCGTTTTCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.217 | 0.209 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCCAAGTTTGACCGTTTTCT&k=0&no_gap=0&offset=0&limit=50
0.328 | 0.111 | search_minus_done; http://172.18.8.135:50400/match?q=AGAAAACGGTCAAACTTGGATGA&k=0&no_gap=0&offset=0&limit=49
0.330 | 0.001 | cgi_end;

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