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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 15:20:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens mRNA, clone: WCC25n18_088, unspecified EST.
FY463049.1:101-120
TTACAATCACTAGCTTCTCCTTCTTAGAAA101TCATCGAACGAACCAATTCAACCGTATTTCCTCATTCATTCATTCATTCA
Cyberlindnera sargentensis strain SHA 17.2 chromosome VI.
CP083469.1:114573-114592
CGATATGTAATTCATCAAGATTCTTTTCCT114573TCATCGAACGAACCAATTCATTATCCTGTGTGATCCTTAATCTCCAATAT
Buathra laborator genome assembly, chromosome: 9.
OW203900.1:4095334-4095353
CCGCCAACATCACTGACAACAGCATCCAGA4095334TCATCGAACGAACCAATTCAGCAGTATGCGAATCACCCGAGGATCTGGAG
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:57895684-57895703
GATGAATGAATATGAATGAGGAAATACGGT57895684TGAATTGGTTCGTTCGATGATTTCTAAGAAGGAGAAGCTAGTGATTGTAA
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:60230502-60230521
AATGAATATGAATGAATGAGGAAATACGGT60230502TGAATTGGTTCGTTCGATGATTTCTAAGAAGGAGAAGCTAGTGATTGTAA
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:57724824-57724843
TGAATGAATGAATGAATGAGGAAATACGGT57724824TGAATTGGTTCGTTCGATGATTTCTAAGAAAGAAGAGCTAGTAATTGTAA
Dicrocoelium dendriticum genome assembly, chromosome: 5.
OX104067.1:1063210-1063229
GTTCAGTTCCGTCAACTGGAACTCCTTCAA1063210TGAATTGGTTCGTTCGATGAATCGGGATAAACCCTTTCTCTCTTCATGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCGAACGAACCAATTCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCGAACGAACCAATTCA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.372 | 0.364 | search_plus_done; http://172.18.8.135:50400/match?q=TCATCGAACGAACCAATTCA&k=0&no_gap=0&offset=0&limit=50
0.471 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=TGAATTGGTTCGTTCGATGA&k=0&no_gap=0&offset=0&limit=47
0.474 | 0.003 | cgi_end;

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