GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 11:29:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: 8iHA03I18, cultivar: YI-0311.
DE998508.1:571-593
GAGAGATATAAGAATGATATACAAAGCAAA571TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAACTT
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:73669972-73669994
GAGAAATATAAGAGTGATATACAAAGCAAA73669972TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAAGTT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8472300-8472322
GAGAGATATAAGAATGATATACAAAGCAAA8472300TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAACTT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8510599-8510621
GAAAGATATAAGAATGATATACAAAGCAAA8510599TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAAGTT
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:8537156-8537178
GAAAGATATAAGAATGATATACAAAGCAAA8537156TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAAGTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:8972891-8972913
GAGAGATATAAGAATGATATACAAAGCAAA8972891TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAACTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:9011184-9011206
GAAAGATATAAGAATGATATACAAAGCAAA9011184TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAAGTT
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:9037688-9037710
GAAAGATATAAGAATGATATACAAAGCAAA9037688TCATGCTAAAAACACTAATCCCCATTAATTATTATAGTAGATATATATAAGTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCATGCTAAAAACACTAATCCCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATGCTAAAAACACTAATCCCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.131 | 0.122 | search_plus_done; http://172.18.8.135:50400/match?q=TCATGCTAAAAACACTAATCCCC&k=0&no_gap=0&offset=0&limit=50
0.161 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGATTAGTGTTTTTAGCATGA&k=0&no_gap=0&offset=0&limit=42
0.161 | 0.000 | cgi_end;

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