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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:20:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 14.
OU015368.1:1606744-1606763
GAAAATAAAGGCTGGCTGGCTTGCTCTCTC1606744TCATGCTTGAACTGTGCCTCCACCATGTCTGCTCTGAGACTCCATTTGTT
Chionomys nivalis genome assembly, chromosome: 6.
OX465454.1:58911772-58911791
ACCTTCATGTGCTTCCCTGCTTATATTATG58911772TCATGCTTGAACTGTGCCTCCTCTTCCACTGTTTGTGTCCATTCTGCTAC
UFL_243_35 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES810921.1:6-25
GGCAC6GAGGCACAGTTCAAGCATGAAATTTGAAGGTGAAGGTGAAGGTGAAGGTG
UFL_185_37 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES813489.1:6-25
GGCAC6GAGGCACAGTTCAAGCATGAAATTTGAAGGTGAAGGTGAAGGTGAAGGTG
TSA: Arachis hypogaea Ahy.Unigene36859 mRNA sequence.
JR573822.1:128-147
TCAAATGCTCTTTCTGCATGAAGGTGAAAA128GAGGCACAGTTCAAGCATGAGCAAAGCCCTCTGCATCCTCTTGGACTTCT
OR_BBa0071G06.r OR_BBa Oryza sativa f. spontanea genomic clone OR_BBa0071G06 3', genomic survey sequence.
CL737240.1:22-41
AGCTACATGGAAAGATCAAAA22GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Oryza glaberrima DNA, clone: W0001-9-A11-33G04R1, left end.
FT508752.1:520-539
TGAAAGCTTAGCTACATGGAAAGATCAAAA520GAGGCACAGTTCAAGCATGAAAACAAAGAGC
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 11.
AP027395.1:7979717-7979736
TGAAAGCTTAGCTACATGGAAAGATCAAAA7979717GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence.
CP012619.1:6462505-6462524
TGAAAGCTTAGCTACATGGAAAGATCAAAA6462505GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Oryza sativa Indica Group cultivar Shuhui498 chromosome 11, partial sequence.
CP018167.1:7516823-7516842
TGAAAGCTTAGCTACATGGAAAGATCAAAA7516823GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:143527443-143527462
TCAAATGCTCTTTCTGCATGAAGGTGAAAA143527443GAGGCACAGTTCAAGCATGAGCAAAGCCCTCTGCATCCTCTTGGACTTCT
Oryza sativa Indica Group cultivar Minghui 63 chromosome 11.
CP054686.1:7620516-7620535
TGAAAGCTTAGCTACATGGAAAGATCAAAA7620516GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Oryza sativa Indica Group cultivar Zhenshan 97 chromosome 11.
CP056062.1:7852427-7852446
TGAAAGCTTAGCTACATGGAAAGATCAAAA7852427GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC
Oryza sativa indica subgroup cultivar ZH8015 chromosome 11.
CP141107.1:7764960-7764979
TGAAAGCTTAGCTACATGGAAAGATCAAAA7764960GAGGCACAGTTCAAGCATGAAAACAAAGAGCAACGATATAGCACACGTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATGCTTGAACTGTGCCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATGCTTGAACTGTGCCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.155 | 0.147 | search_plus_done; http://172.18.8.135:50400/match?q=TCATGCTTGAACTGTGCCTC&k=0&no_gap=0&offset=0&limit=50
0.438 | 0.283 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGCACAGTTCAAGCATGA&k=0&no_gap=0&offset=0&limit=48
0.446 | 0.008 | cgi_end;

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