GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:40:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 12, sequence.
AP026707.1:150406378-150406400
TCGAAAGCTGAATACTTGGACTCTGAAGGA150406378TCATTTTCCTATGTCATTCATGGATCAGATGTTAGACCGTCTTGTGGGTAGAG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 1.
CP124719.1:109199458-109199480
TAGGAAGTTGAATTCATGGACTGAAAAGGA109199458TCATTTTCCTATGTCATTCATGGATCAGATATTAGATCATTTTTCTGGTAGAG
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:2923022-2923044
CCTCTACCGCAAGACAGTCTAAATTCTAGT2923022CCATGAATGACATAGGAAAATGATCCTTCTACGTCCAAGTTTTTAGCTTCCAA
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:53933251-53933273
TTCTACCCTCAAGATGGTCTAACTTCTGGT53933251CCATGAATGACATAGGAAAATGATCCGTCTGAGTCCAATTATTTAGCTTCTAA
Capsicum annuum Takanotsume DNA, chromosome 8, sequence.
AP026703.1:99933149-99933171
ACATAGGAAAATGATCCTTCTCCATCTAGT99933149CCATGAATGACATAGGAAAATGATCCTTCTCCATCCAAGTGTTCAGCTTCTGA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:62985960-62985982
CTTTACCAGCAAGACGGTCTAACATCTGAT62985960CCATGAATGACATAGGAAAATGATCTTTTTCTGTCTAAGAATTCAGCTTTTGA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 4.
CP124716.1:26227208-26227230
ATCTACCAGCAAGACGGTCTAACATTTGGT26227208CCATGAATGACATAGGAAAATGATCCTTCTCGGTCTATGAATTCATCTTCCTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 12.
CP124720.1:112073050-112073072
CTCTACCCACAAGACGGTCTAACATCTGAT112073050CCATGAATGACATAGGAAAATGATCCTTCAGAGTCCAAGTATTCAGCTTTCGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 8.
CP124724.1:113162060-113162082
ACATAGGAAAATGATCCTTCTCCATCTAGT113162060CCATGAATGACATAGGAAAATGATCCTTCTCCATCCAAGTGTTCAGCTTCTGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:3049047-3049069
CCTCTACCGCAAGACAGTCTAAATTCTAGT3049047CCATGAATGACATAGGAAAATGATCCTTCTACGTCCAAGTTTTTAGCTTCCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCATTTTCCTATGTCATTCATGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATTTTCCTATGTCATTCATGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=TCATTTTCCTATGTCATTCATGG&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CCATGAATGACATAGGAAAATGA&k=0&no_gap=0&offset=0&limit=48
0.121 | 0.005 | cgi_end;

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