GGGenome | Results

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2025-04-06 04:45:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Macaca fascicularis complete genome, chromosome chr2.
LT160001.1:185288623-185288642

TTACAAAGGTTTAATAATTTGAATGTTACT185288623TCCAACATCAAAGAGCCTCCTCCCTTGAACTTTCAGTGGTTACCGATTTG

Sciurus carolinensis genome assembly, chromosome: 2.
LR738591.1:167902260-167902279

ACCTGTGGGTCAGGGCCTTCACAGCCCTCC167902260TCCAACATCAAAGAGCCTCCTGCTCCTTCCCTACTGGGGGCTCCAGTACC

Dianthus caryophyllus mRNA, clone: CES09J06, 5' end sequence.
FY385722.1:72-91

ACATCACATATTGCATCAACGAAGCTCAAA72TCCAACATCAAAGAGCCTCCACACTTTACCAGACATAATGCTTCTACATA

Acomys percivali genome assembly, chromosome: 3.
OU015744.1:82979136-82979155

CCAGGAGAGGTCTAAGTGTGTCCTCTACAA82979136GGAGGCTCTTTGATGTTGGAGGCACACTGAAGAAGAAGATGGGAGGCCCT

Andrena haemorrhoa genome assembly, chromosome: 6.
OU342945.1:27465328-27465347

GATCGAAAATTAGGAAAAGCTTAGTTTTTG27465328GGAGGCTCTTTGATGTTGGAATATGGATGAGCAATTAGGTGGAATGTATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.171 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAACATCAAAGAGCCTCC&k=0&no_gap=0&offset=0&limit=50
0.222 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGCTCTTTGATGTTGGA&k=0&no_gap=0&offset=0&limit=47
0.223 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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