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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 01:37:14, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens, clone RP11-326N17, complete sequence.
AC022929.6:74156-74175
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC74156TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Homo sapiens DNA, chromosome 15, nearly complete genome.
AP023475.1:32497949-32497968
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC32497949TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Homo sapiens isolate CHM13 chromosome 15.
CP068263.2:36585197-36585216
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC36585197TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Homo sapiens isolate NA24385 chromosome 15.
CP139528.2:37707341-37707360
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC37707341TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Homo sapiens isolate NA24385 chromosome 15.
CP139551.2:33139602-33139621
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC33139602TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Acomys percivali genome assembly, chromosome: 16.
OU015757.1:19215885-19215904
AAGGCAGGACCTCCCTCTGTCATGTTTTCC19215885TCCAATCCCACTCTGGTTTCCAGAATGTGAAACTAAATCTCCCTCAGAGA
Apodemus agrarius genome assembly, chromosome: 7.
OZ030012.1:65573174-65573193
AAGGGCAGAGCTGGAAGGAGCCACACAGCA65573174TCCAATCCCACTCTGGTTTCCGGGGCGCGGAAGGAAGGTGGGAAGATCTG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 5.
OX596089.1:19945502-19945521
CCAGGGCCCAGGTAATATTTTACAGAGGCT19945502TCCAATCCCACTCTGGTTTCTCTCAGAGACCCTCTTTTCTGATTCTATCA
Eukaryotic synthetic construct chromosome 15.
CP034493.1:19072144-19072163
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC19072144TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Eukaryotic synthetic construct chromosome 15.
CP034518.1:19072144-19072163
ATAAGTGAGTCTAGTTTTCTGCTCACAGCC19072144TCCAATCCCACTCTGGTTTCTGAGATTAACCATGGTTAATAGTTTTGCGT
Agapetus fuscipes genome assembly, chromosome: 2.
OX637334.1:13574324-13574343
TTATAAGCTCCCATCTTTTCTTTTTCAATT13574324TCCAATCCCACTCTGGTTTCAACAGTTGCAAAGTTTATGTTCATTTAGTG
Agapetus fuscipes genome assembly, chromosome: 13.
OX637345.1:10785986-10786005
TTATAAGCTCCCATCTTTTCTTTTTCAATT10785986TCCAATCCCACTCTGGTTTCAACAGTTGCAAAGTTTATGTTCATTTAGTG
Agapetus fuscipes genome assembly, chromosome: 17.
OX637349.1:5502918-5502937
TTATAAGCTCCCATCTTTTCTTTTTCAATT5502918TCCAATCCCACTCTGGTTTCAACAGTTGCAAAGTTTATGTTCATTTAGTG
Agapetus fuscipes genome assembly, chromosome: 21.
OX637353.1:6726471-6726490
TTATAAGCTCCCATCTTTTCTTTTTCAATT6726471TCCAATCCCACTCTGGTTTCAACAGTTGCAAAGTTTATGTTCATTTAGTG
Agapetus fuscipes genome assembly, chromosome: 25.
OX637357.1:14354423-14354442
TTATAAGCTCCCATCTTTTCTTTTTCAATT14354423TCCAATCCCACTCTGGTTTCAACAGTTGCAAAGTTTATGTTCATTTAGTG
Homo sapiens, clone RP11-45N10, complete sequence.
AC009724.9:105634-105653
ACGCAAAACTATTAACCATGGTTAATCTCA105634GAAACCAGAGTGGGATTGGAGGCTGTGAGCAGAAAACTAGACTCACTTAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 6.
OX459942.2:80811961-80811980
TGATAGAATCAGAAAAGAGGGTCTCTGAGA80811961GAAACCAGAGTGGGATTGGAAGCCTCTGTAAAATATTACCTGGGCCCTGG
Homo sapiens chromosome 15 clone RP11-449O9 map 15, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC090715.3:114517-114536
ACGCAAAACTATTAACCATGGTTAATCTCA114517GAAACCAGAGTGGGATTGGAGGCTGTGAGCAGAAAACTAGACTCACTTAT
Agapetus fuscipes genome assembly, chromosome: 5.
OX637337.1:15564659-15564678
CACTAAATGAACATAAACTTTGCAACTGTT15564659GAAACCAGAGTGGGATTGGAAATTGAAAAAGAAAAGATGGGAGCTTATAA
Agapetus fuscipes genome assembly, chromosome: 7.
OX637339.1:16507928-16507947
CACTAAATGAACATAAACTTTGCAACTGTT16507928GAAACCAGAGTGGGATTGGAAATTGAAAAAGAAAAGATGGGAGCTTATAA
Agapetus fuscipes genome assembly, chromosome: 27.
OX637359.1:9552525-9552544
CACTAAATGAACATAAACTTTGCAACTGTT9552525GAAACCAGAGTGGGATTGGAAATTGAAAAAGAAAAGATGGGAGCTTATAA
Stomoxys calcitrans genome assembly, chromosome: 1.
OY720435.1:243133223-243133242
TTCTATAACATTTCAGACACAACAAACATA243133223GAAACCAGAGTGGGATTGGATAAGCAATCACCACCAGAGACATACGCCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCAATCCCACTCTGGTTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAATCCCACTCTGGTTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.357 | 0.347 | search_plus_done; http://172.18.8.135:50800/match?q=TCCAATCCCACTCTGGTTTC&k=0&no_gap=0&offset=0&limit=50
0.491 | 0.134 | search_minus_done; http://172.18.8.135:50800/match?q=GAAACCAGAGTGGGATTGGA&k=0&no_gap=0&offset=0&limit=35
0.496 | 0.005 | cgi_end;

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