GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 09:22:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mobula hypostoma genome assembly, chromosome: 7.
OY992598.1:161170841-161170861
CTGCACCTGGGCTCCCAAGTCCTTTGCAGC161170841TCCAATTGCTGAATTCTGTCCCTATTTAGAAAATAACCCTCTATTCCTCCT
Trifolium pratense cDNA clone:RCE22421.
BB916920.1:281-301
ATCACTGCAAGATATATCAAAGTCACCAAG281TCCAATTGCTGAATTCTGTCCACTAACACCATATGAAGCTTCGTTTCCATG
Trifolium repens mRNA, clone: WCC36f14, unspecified EST.
FY466771.1:288-308
ATCATTGCAAGATATATCAAAGTCTCCAAG288TCCAATTGCTGAATTCTGTCCACTAACACCATATGAAGCATTGTTTCCGTG
Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:53211952-53211972
ATCACTGCAAGATATATCAAAGTCTCCAAG53211952TCCAATTGCTGAATTCTGTCCACTAACACCATATGAAGCATCATTTCCATG
Trifolium dubium genome assembly, chromosome: 7.
OX638068.1:41519118-41519138
ATCACTGCAAGATATATCAAAGTCTGCAAG41519118TCCAATTGCTGAATTCTGTCCACTAACACCATATGAAGCATCGTTTCCATG
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:6432853-6432873
CACGGAAACGATGCTTCATATGGTGTTAGT6432853GGACAGAATTCAGCAATTGGACTTGGAGACTTTGATATATCTTGCAGTGAT
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:6685892-6685912
CACGGAAACAATGCTTCATATGGTGTTAGT6685892GGACAGAATTCAGCAATTGGACTTGGAGACTTTGATATATCTTGCAGTGAT
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:4144603-4144623
CATGGAAACGATCCTTCATATGGTGTTAGT4144603GGACAGAATTCAGCAATTGGACTTGGAGACTTTGATATTTCTTGCAGTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCAATTGCTGAATTCTGTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAATTGCTGAATTCTGTCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.276 | 0.268 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAATTGCTGAATTCTGTCC&k=0&no_gap=0&offset=0&limit=50
0.342 | 0.066 | search_minus_done; http://172.18.8.135:50400/match?q=GGACAGAATTCAGCAATTGGA&k=0&no_gap=0&offset=0&limit=45
0.344 | 0.002 | cgi_end;

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