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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 08:16:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:75849428-75849447
TTCTATAGATTATGCTGAGGGTAAAACGAT75849428TCCACACAAACTCACCGAAAAGTGTACTAGGTCGCATCAAGTAGTAATAA
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:94100960-94100979
CCAAAACAGTAATGGCTTAGCCCAAAAACT94100960TCCACACAAACTCACCGAAAAGTGAACCAGTTGCTAAAAAATGAAAATCA
Dryomyza anilis genome assembly, chromosome: 1.
OX638130.1:126522860-126522879
AAATTTTGCTATTTCTTCTGTCCAAAACTC126522860TCCACACAAACTCACCGAAATAATACTCAACACACAGAATTAATAACAAT
Acipenser ruthenus genome assembly, chromosome: 1.
OV737682.1:115207528-115207547
CCTCTCCTGCCTCGATCTCACCAAGCGCCC115207528TTTCGGTGAGTTTGTGTGGAGCGAAATAACTGACCAAATCACCTTAATCC
Acipenser ruthenus genome assembly, chromosome: 1.
OV754670.1:115963577-115963596
CCTCTCCTGCCTCGATCTCACCAAGCGCCC115963577TTTCGGTGAGTTTGTGTGGAGCGAAATAACTGACCAAATCACCTTAATCC
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:57354681-57354700
TTATTACTACTTGATGTGACCCGATATACT57354681TTTCGGTGAGTTTGTGTGGAATTGTTTTTCCATCATCAAGTTCTTGGCGC
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:66045713-66045732
TTTTTACTACTTGATGCGACCCGGTACACT66045713TTTCGGTGAGTTTGTGTGGAATCAATTTTCCCTCATCAGTGATCAATGGG
Eupsilia transversa genome assembly, chromosome: 2.
OU611874.1:3047900-3047919
TAACTCTTTGGTGTTTGAGTTTGAATTGAT3047900TTTCGGTGAGTTTGTGTGGAGTATCGTATTGGTTTTGTAAGTGAATTTGT
Anopheles maculipalpis genome assembly, chromosome: 3.
OX030896.1:29301727-29301746
CTATCTTCTTCACTATCTATTTATCTGCGA29301727TTTCGGTGAGTTTGTGTGGATGTGTTTTCCAGCTTTTCGCGAATCATCGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCACACAAACTCACCGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCACACAAACTCACCGAAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.325 | 0.316 | search_plus_done; http://172.18.8.135:50400/match?q=TCCACACAAACTCACCGAAA&k=0&no_gap=0&offset=0&limit=50
0.457 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCGGTGAGTTTGTGTGGA&k=0&no_gap=0&offset=0&limit=47
0.461 | 0.004 | cgi_end;

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