GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 12:02:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Myripristis murdjan genome assembly, chromosome: 1.
LR597550.1:17772395-17772414
TTATCCTTTTTTTTATTTTTATCCTCATAT17772395TCCACATTTTTGCCTGTTGAGTCCAAATGGTCCTCGCTTCCATTGACCAT
Myripristis murdjan genome assembly, chromosome: 4.
LR597553.1:18093877-18093896
TGATATTTTTCCCCTTTTTTCCACACTTAA18093877TCCACATTTTTGCCTGTTGAGACTAAATGGTCCTCGCTTCCATGGACCAT
Myripristis murdjan genome assembly, chromosome: 9.
LR597558.1:14137182-14137201
TGTTATTTTTACCCCTTTTTCCACACTTTT14137182TCCACATTTTTGCCTGTTGAGTCTAAATGGTCTATTGGTCTAAATGGCAG
Felis catus Senzu DNA, chromosome: E3, American Shorthair breed.
AP023167.1:3634338-3634357
GTTGCCAGGGAGGAAGGGAGAAGTGTTGGG3634338TCAACAGGCAAAAATGTGGACTGCGGTTTGGTAAGGACTAGTGTGTTCCC
Myripristis murdjan genome assembly, chromosome: 3.
LR597552.1:41799308-41799327
ATAAAAAACTTCAGCGAGGACCATTTAGAC41799308TCAACAGGCAAAAATGTGGAATAAGTGTGGATGATGAGAACCATGTGGAC
Sprattus sprattus genome assembly, chromosome: 5.
OY735289.1:21069142-21069161
GGACGTAAAGCCGGATTTCATGGAAATATT21069142TCAACAGGCAAAAATGTGGAATCTCATTTATCGCACTACTTTTTCTTGGA
Dicrocoelium dendriticum genome assembly, scaffold: DDEL_scaffold0141626.
LK543963.1:351-370
AACAAATCCATTGATCCGTCTGTCTCAGAG351TCAACAGGCAAAAATGTGGACAGCTAGCGCGCACACTCGCAATCTAGGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCACATTTTTGCCTGTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCACATTTTTGCCTGTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.116 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TCCACATTTTTGCCTGTTGA&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACAGGCAAAAATGTGGA&k=0&no_gap=0&offset=0&limit=47
0.159 | 0.003 | cgi_end;

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