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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-17 15:37:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 23.
OU383797.1:5274713-5274732
GTTGGGTTTAGGGGAAAGCACCTCAGGAAC5274713TCCAGGGAATTCTGGTTTTGAAGCCATCCCATCTTTCTGTCAGGATTGAG
Trifolium pratense cDNA clone:RCC00982.
BB929533.1:79-98
GGTCGACGGTATCGATAAGCTTGATATCGG79TCCAGGGAATTCTGGTTTTGATGTTTCTGGTGGTGGTGGTGGTGGTAGTG
Trifolium repens mRNA, clone: WCC07i05_069, unspecified EST.
FY456589.1:592-611
AGTTTGGTCTGGTGGTGGAATTGTTGTTCG592TCCAGGGAATTCTGGTTTTGATGTTTCTGGTGGTGGTGGTGGTGGTGGAG
Trifolium repens mRNA, clone: WCC33f15_036, unspecified EST.
FY465703.1:259-278
AGTTTGGTCTGGTGGTGGAATTGTTGTTCG259TCCAGGGAATTCTGGTTTTGATGTTTCTGGTGGTGGTGGTGGTGGTGGAG
Trifolium subterraneum genome assembly, chromosome: 2.
OX637462.1:18202567-18202586
AGTTTGGTCTGGTGGTGGAATGGTTGTTCG18202567TCCAGGGAATTCTGGTTTTGATGTTTCTGGTGGTGGTGGTGGAGGAGGTG
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:52908891-52908910
AGTTTGGTCTGGTGGTGGAATTGTTGTTCG52908891TCCAGGGAATTCTGGTTTTGATGTTGGTGGTGGTGGTGGTAGTGGTGGAG
Trifolium pratense cDNA clone:RCC00692.
BB929289.1:414-433
CACTACCACCACCACCACCACCAGAAACAT414CAAAACCAGAATTCCCTGGACCGATATCAAGCTAATCGGATCCCCGGGTA
Trifolium pratense cDNA clone:RCC01828.
BB930237.1:478-497
CACTACCACCACCACCACCACCAGAAACAT478CAAAACCAGAATTCCCTGGACCGATATCAAGCTTATCGATACCGTCGACC
Trifolium pratense DNA, clone:RCG03181.
DE214651.1:169-188
CACCACCACCACCACCACCACCAGAAACAT169CAAAACCAGAATTCCCTGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Trifolium pratense DNA, clone:RCG04496.
DE215739.1:166-185
CACCACCACCACCACCACCACCAGAAACAT166CAAAACCAGAATTCCCTGGAC
Vitis rotundifolia cultivar Noble chromosome 18.
CP092943.1:11496633-11496652
GAACCGGTTTCTGAAGAAGAAAAAGGGACA11496633CAAAACCAGAATTCCCTGGAGGAGAAAAGCAAAGGGGATAATTTTCTGGA
Vitis rotundifolia cultivar Noble chromosome 18.
CP092943.1:11511811-11511830
GAACCGGTTTCTGAAGAAGAAAAAGGGACA11511811CAAAACCAGAATTCCCTGGAGGAGAAAAGCAAAGGGGATAATTTTCTGGA
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:39589534-39589553
CACCACCACCACCACCACCACCAGAAACAT39589534CAAAACCAGAATTCCCTGGACGAACAACAATTCCACCACCAGACCAAACT
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:43607472-43607491
TAGCAGCACCACCACCACCACCAGAAACAT43607472CAAAACCAGAATTCCCTGGACGAACAACAATTCCACCACCAGACCAAACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCAGGGAATTCTGGTTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCAGGGAATTCTGGTTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.309 | 0.301 | search_plus_done; http://172.18.8.135:50400/match?q=TCCAGGGAATTCTGGTTTTG&k=0&no_gap=0&offset=0&limit=50
0.386 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAACCAGAATTCCCTGGA&k=0&no_gap=0&offset=0&limit=44
0.392 | 0.006 | cgi_end;

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