GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:47:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thunnus albacares genome assembly, chromosome: 2.
OU607593.1:23589137-23589156
AAAAACATTGAGTGGAGGTGTCCAGCAATA23589137TCCATCATTTGGCACACATCTGTCTTGGATGTTGCTTAGAATTTGATTCT
Thunnus thynnus genome assembly, chromosome: 2.
OZ004733.1:24505210-24505229
AAAAACATTGAGTGGAGGTGTCCAGCAGTA24505210TCCATCATTTGGCACACATCTGTCTTGGATGTTGCTTAGAATTTGATTCT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:105254435-105254454
GCTTTCCAATTGCAGTGTTGTTGAATGTTT105254435TCCATCATTTGGCACACATCTATTGAATATTTTCCACCTACATAACAAAA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:107942244-107942263
CCTTCTAGTTGTAATTGTTGTTAATTGTTT107942244TCCATCATTTGGCACACATCTGTTGAATATTTTTCACCTATATAATAAAA
Alisma plantago-aquatica genome assembly, chromosome: 7.
OY856415.1:545411603-545411622
CCCTATAGAATTTAGATGCATGTCCTTCCA545411603TCCATCATTTGGCACACATCCACAACAACCATTCATAGTAAACATCATAT
Thunnus maccoyii genome assembly, chromosome: 9.
OU343199.1:15997023-15997042
AGAATCAAATTCTAAGCAACATCCAAGACA15997023GATGTGTGCCAAATGATGGATATTGCTGGACACCTCCACTCAATGTTTTT
Falco punctatus genome assembly, chromosome: 12.
OY723445.1:31216341-31216360
TACCTGCAGTCTCCTCTTAGCGCTTTGACA31216341GATGTGTGCCAAATGATGGACTGTCTCTGTTGTCAATTATTTGTCACCTC
Bedellia somnulentella genome assembly, chromosome: 9.
OY755179.1:3015902-3015921
TAGTCAAATCTGCGCTGGCACAAAATCTTG3015902GATGTGTGCCAAATGATGGACAATTTGCGACTGGTGCGACGAAAAGTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCATCATTTGGCACACATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCATCATTTGGCACACATC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.146 | 0.138 | search_plus_done; http://172.18.8.135:50400/match?q=TCCATCATTTGGCACACATC&k=0&no_gap=0&offset=0&limit=50
0.240 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=GATGTGTGCCAAATGATGGA&k=0&no_gap=0&offset=0&limit=45
0.242 | 0.002 | cgi_end;

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