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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 19:45:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: AHGS45M18.
DH961667.1:176-195
TGGTCTTAGTGAGCTTTGGTGATGAATCTC176TCCATCTCCCAAGATTCAGCGGTGGCAGTTACTGCCTTTCCTTTCCTCTT
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:88822520-88822539
TGGTCTTAGTGAGCTTTGGTGATGAATCTC88822520TCCATCTCCCAAGATTCAGCGGTGGCAGTTACTGCCTTTCCTTTCCTCTT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:94964267-94964286
AAGAGGAAAGGAAAGGCAGTAGCCACTCCC94964267GCTGAATCTTGGGAGATGGAAAGATTCATCACCAAAGCCCACCAAGACCA
Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:95162938-95162957
AAGAGGAAAGGAAAGGCAGTAGCCACTCCC95162938GCTGAATCTTGGGAGATGGAAAGATTCATCACCAAAGCCCACCAAGACCA
Tipula helvola genome assembly, chromosome: 2.
OY744482.1:360338201-360338220
TAGGCTTTCAACAGTTGGCGTTTGGACGTT360338201GCTGAATCTTGGGAGATGGACTGGGTATTATGTAAAAATTCTAATTTATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCATCTCCCAAGATTCAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCATCTCCCAAGATTCAGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=TCCATCTCCCAAGATTCAGC&k=0&no_gap=0&offset=0&limit=50
0.282 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGAATCTTGGGAGATGGA&k=0&no_gap=0&offset=0&limit=48
0.284 | 0.002 | cgi_end;

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