GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-18 22:03:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cucumis melo genomic chromosome, chr_12.
LN713266.1:20483425-20483447
GTGAATTACATTTATATGGATCCTATATAT20483425TCCATTGGTTAAAAAGAAAGACGAAATTTAGCGAAATTTTAAAAATAAAAATA
Cucumis melo genomic scaffold, anchoredscaffold00001.
LN681932.1:5916947-5916969
TATTTTTATTTTTAAAATTTCGCTAAATTT5916947CGTCTTTCTTTTTAACCAATGGAATATATAGGATCCATATAAATGTAATTCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCATTGGTTAAAAAGAAAGACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCATTGGTTAAAAAGAAAGACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.251 | 0.242 | search_plus_done; http://172.18.8.135:50800/match?q=TCCATTGGTTAAAAAGAAAGACG&k=0&no_gap=0&offset=0&limit=50
0.366 | 0.115 | search_minus_done; http://172.18.8.135:50800/match?q=CGTCTTTCTTTTTAACCAATGGA&k=0&no_gap=0&offset=0&limit=49
0.367 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).