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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-06 20:23:48, GGGenome : DDBJ release 139.0 (Sep, 2025)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST622070 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMIN23 3' end, mRNA sequence.
BQ514655.1:405-426
TTTCATGAGTGAAAGCTCAGAGCTAAGGAC405TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTATATATTCA
33211.3 In vitro Root Solanum tuberosum cDNA clone 33211 3', mRNA sequence.
DN906154.1:419-440
TTTCATGAGTGAAAGCTCAGAGCTAAGGAC419TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTATATATTCA
Solanum lycopersicum Micro-Tom DNA, chromosome 4, draft genome sequence.
AP028938.1:7239522-7239543
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC7239522TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Solanum cheesmaniae LA0166 DNA, chromosome 4, nearly complete sequence.
AP038853.1:6776597-6776618
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC6776597TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Solanum lycopersicum cultivar I-3 chromosome 4.
CP023760.1:6596819-6596840
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC6596819TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Solanum tuberosum cultivar P8 chromosome 4.
CP046685.1:10409427-10409448
TTTCATGAGTGAAASCTCAGAGCTAAGGAC10409427TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTRTATATTCA
Solanum tuberosum cultivar MSH/14-112 chromosome 4.
CP046699.1:10409619-10409640
TTTCATGAGTGAAASCTCAGAGCTAAGGAC10409619TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTRTATATTCA
Solanum pinnatisectum cultivar CGN17745 chromosome 4.
CP047561.1:10407265-10407286
TTTCATGAGTGAAACCTCAGAGCTAAGGAC10407265TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTGTATATTCA
Solanum tuberosum cultivar Solyntus chromosome 4.
CP055237.1:11937620-11937641
TTTCATGAGTGAAAGCTCAGAGCTAAGGAC11937620TCCATTTTCCATTTTCAACCTTTTATTCTCATCAACAAGATTTATATATTCA
Solanum verrucosum cultivar 11H23 chromosome 4.
CP133615.1:11271545-11271566
TTTCATGAGTGAAAGCTCAGAGCTAAGGAC11271545TCCATTTTCCATTTTCAACCTTTTATTCTCATCGACAAGATTTATATATTCA
Solanum pennellii chromosome ch04, complete genome.
HG975443.1:6683775-6683796
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC6683775TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Solanum lycopersicum chromosome ch04, complete genome.
HG975516.1:6596850-6596871
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC6596850TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Solanum lycopersicum genome assembly, chromosome: 4.
OU640347.1:7259450-7259471
TTTCATGAGTAAAAGCTCAGAGCTAAGGAC7259450TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATACTCA
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:18884346-18884367
AAACTCATTTCCCCTTTAGTCAATTTACTT18884346TCCATTTTCCATTTTCAACCTTTTTCCCATACAATACCACTCTTATACATCC
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:38257321-38257342
TTAACTTACTCCCCTTTGGTCAATTTATTT38257321TCCATTTTCCATTTTCAACCTTTTCCCTCACACAATACCACTTTTATACATC
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:53282079-53282100
GTCAACTCACATCCCTTGGTCAATTTACTT53282079TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:57546815-57546836
TCAACTTACTCCCCTTTGGTTAATTCATTT57546815TCCATTTTCCATTTTCAACCTTTTTTCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:85827444-85827465
TTAACTTACTCCCCTTTGGTCAACTTATTT85827444TCCATTTTCCATTTTCAACCTTTTTCCACACAATACCACTTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:102111485-102111506
CAACTCATTTCCCCTTTAGTCAACTCACTT102111485TCCATTTTCCATTTTCAACCTTTTCCCACACAATACCACTTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:127671085-127671106
GTCAACTCATATCCCTTGGTCAACTTCTTT127671085TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:139007090-139007111
GTCAACTTACTCACCTTAGTCAACTTATTT139007090TCCATTTTCCATTTTCAACCTTTTTCTCACACAATACCACTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 2.
OZ123702.1:30336910-30336931
TTAACTTACTCCCCTTCGGTCAACTTATTT30336910TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 2.
OZ123702.1:52222392-52222413
TTAACTTACTCCCCTCTGGTTAACTTATTT52222392TCCATTTTCCATTTTCAACCTTTTCCCCACACAATAACACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 2.
OZ123702.1:131782200-131782221
ACTCCCCTTTGGTTAACACATTTCCCATTT131782200TCCATTTTCCATTTTCAACCTTTTTCTCATACAATATCACTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 3.
OZ123703.1:77123859-77123880
TCAACTTACTCCTCTTTGGTCAAATCATTT77123859TCCATTTTCCATTTTCAACCTTTTCCCTACACAATATTACTTTTATATATCC
Tamarix gallica genome assembly, chromosome: 3.
OZ123703.1:84144485-84144506
TTAACTTACTCCCCTTTGGTCAACTTATTT84144485TCCATTTTCCATTTTCAACCTTTTCCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 4.
OZ123704.1:7927616-7927637
TTAACTTACTCCCCTTTCGTCAACTTATTT7927616TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 4.
OZ123704.1:53667971-53667992
TACTCAACTTGGTCAACTTATTTTCCATTT53667971TCCATTTTCCATTTTCAACCTTTTTCCCATACAATACCAATTTCATACATCC
Tamarix gallica genome assembly, chromosome: 4.
OZ123704.1:74809904-74809925
GTCAACTTACTCCCCTTGGTCAAATTCTTT74809904TCCATTTTCCATTTTCAACCTTTTCTCCACACAATACTACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 5.
OZ123705.1:18682344-18682365
TTTTTGTTAACTTACTCCCCTTTGGTATTT18682344TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 5.
OZ123705.1:83560779-83560800
TTAGCTTACTCCCCTTTGGTCAACTTATTT83560779TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCA
Tamarix gallica genome assembly, chromosome: 6.
OZ123706.1:3315387-3315408
TTAACTTACTCCCCTTTGGTCAACACACTT3315387TCCATTTTCCATTTTCAACCTTTTCCCCACATAATACTACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 6.
OZ123706.1:47984955-47984976
TTAACTTACTCCCCTTTGGTTAACTTATTT47984955TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 6.
OZ123706.1:70976633-70976654
CTAACTTACTCCCATTTGGTCAACTTATTT70976633TCCATTTTCCATTTTCAACCTTTTTCCACACAATACCACTTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 6.
OZ123706.1:73469630-73469651
GGTCAACTCACATCCATTGGTCAACTTCTT73469630TCCATTTTCCATTTTCAACCTTTTTCCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 6.
OZ123706.1:82490452-82490473
CCAACTTATTCCCCTTTGGTCAACTTATTT82490452TCCATTTTCCATTTTCAACCTTTTTTCCAGACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 7.
OZ123707.1:9507037-9507058
TCAACTTACTCCCCTTTGGTTAACTTATTT9507037TCCATTTTCCATTTTCAACCTTTATACATCCTCACATGCATGTCTAAAGGGT
Tamarix gallica genome assembly, chromosome: 7.
OZ123707.1:80187421-80187442
CAACTCATTTCCCATTTAGTCAACTTACTT80187421TCCATTTTCCATTTTCAACCTTTTTTCCACACAATACCACTTTTATACATCC
Tamarix gallica genome assembly, chromosome: 8.
OZ123708.1:38802385-38802406
GTTAACTTACTCACCTTAGTCAACTTATTT38802385TCCATTTTCCATTTTCAACCTTGTTCTCACACAATACCACTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 8.
OZ123708.1:39515250-39515271
TCAACTTACTCCCCTTTGGTTAACACATTT39515250TCCATTTTCCATTTTCAACCTTTTTCTCACACAATACCACTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 9.
OZ123709.1:11677330-11677351
GTCAACTTACTCCTCTTGGTCAACTTCTTT11677330TCCATTTTCCATTTTCAACCTTTTCCTACACAATACCACTTTTATACATCCT
Tamarix gallica genome assembly, chromosome: 12.
OZ123712.1:50790531-50790552
GTCAACTTACTCCTCTTGGTCAACTTCTTT50790531TCCATTTTCCATTTTCAACCTTTTTCCCACATAATACCACTTTTATACATCC
Solanum nigrum genome assembly, chromosome: 5.
OZ176016.1:68703728-68703749
TTTCATGAGTGAAAGCTCAGAGCTAAGGAC68703728TCCATTTTCCATTTTCAACCTTTTATTTTCGTCGACAAGATTTATATATTCA
Rhagonycha fulva genome assembly, chromosome: 3.
HG996556.1:24196486-24196507
GACCCAATATTTGATTTGTTGATACCACTA24196486TCCATTTTCCATTTTCAACCTTTTGAATTTTGAGGTTGTTTAATTTGATAAT
Oryzias latipes strain HSOK chromosome 3.
CP020623.1:37537704-37537725
GCTGAAATTATTACATATCTAATTTTCTTT37537704TCCATTTTCCATTTTCAACCTTTACCAACTATTTTGACTGCATCTGCATATG
KR 1020130015711-A/1: A transcription factor gene, CaHSTF1 related to plant defense response and transgenic plants using the same gene.
DI249426.1:1150-1171
ACAATATATAAATCTTGTTGATGAAAATAA1150AAGGTTGAAAATGGAAAATGGAGTTCTTAATTCTGAGCTTTCACTTATGAAA
Sequence 7638 from patent US 7960612.
GY265685.1:264-285
TGAGTATATAAATCTTGTCGACGAAAATAA264AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
Sequence 10783 from patent US 8030546.
GY463008.1:264-285
TGAGTATATAAATCTTGTCGACGAAAATAA264AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
Sequence 10783 from patent US 10597667.
MO974161.1:264-285
TGAGTATATAAATCTTGTCGACGAAAATAA264AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
EST527978 cTOS Solanum lycopersicum cDNA clone cTOS21D12 5' end, mRNA sequence.
BI209938.1:264-285
TGAGTATATAAATCTTGTCGACGAAAATAA264AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
PI002F10 infected tomato, outside of lesion 3 dpi Phytophthora infestans cDNA, mRNA sequence.
CV968777.1:93-114
TGAGTATATAAATCTTGTCGACGAAAATAA93AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
KS23001B12 KS23 Capsicum annuum cDNA, mRNA sequence.
GD111046.1:621-642
ACAATATATAAATCTTGTTGATGAAAATAA621AAGGTTGAAAATGGAAAATGGAGTTCTTAATTCTGAGCTTTCACTTATGAAA
TSA: Capsicum annuum MGMT_Contig41271 mRNA sequence.
JW091515.1:1210-1231
ACAATATATAAATCTTGTTGATGAAAATAA1210AAGGTTGAAAATGGAAAATGGAGTTCTTAATTCTGAGCTTTCACTTATGAAA
405872 Tomato HindIII BAC Library Solanum lycopersicum genomic clone LE_HBa0215H21 3, genomic survey sequence.
DU895892.1:349-370
TGAGTATATAAATCTTGTCGACCAAAATAA349AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAA
Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:3706525-3706546
ACAATATATAAATCTTGTTGATGAAAATAA3706525AAGGTTGAAAATGGAAAATGGAGTTCTTAATTCTGAGCTTTCACTTATGAAA
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 12.
CP124708.1:1326192-1326213
TGAATATATAAATCTTGTCGACGAAAATAA1326192AAGGTTGAAAATGGAAAATGGAGTTCTTAGCTCTGAGCTTTCACTCATGAAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:4298043-4298064
ACAATATATAAATCTTGTTGATGAAAATAA4298043AAGGTTGAAAATGGAAAATGGAGTTCTTAATTCTGAGCTTTCACTTATGAAA
Lycium barbarum cultivar Ningqi No.1 chromosome 10.
CP145795.1:125596817-125596838
TGAATATACAAATCTTGTCGACGAAAATAA125596817AAGGTTGAAAATGGAAAATGGAGTCCTTAGTTCTGAGCTTTCACTCATGAAA
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:51761535-51761556
GGATGTATAAAAGTGGTATTGTGTGGGGAA51761535AAGGTTGAAAATGGAAAATGGAAAATGTGTTGACCAAAGGGGAGTAAGTTGA
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:77035470-77035491
GGATGTATAAAAGTGGTATTGTGTGGGAAA77035470AAGGTTGAAAATGGAAAATGGAAAATGTGTTGACCAAAGGGGAGTAGGTTGA
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:90008771-90008792
GGATGTATAAAAGTGGTATTGTGTGGGGAA90008771AAGGTTGAAAATGGAAAATGGAAAATGTGTTGACCAAAGGGGAGTAAGTTGA
Tamarix gallica genome assembly, chromosome: 2.
OZ123702.1:2256385-2256406
GGATGTATAAAAGTGGCATTGTGTGGGAAA2256385AAGGTTGAAAATGGAAAATGGAAAATGTGTTGACCAAAGGGGAGTAAGTTGA
Tamarix gallica genome assembly, chromosome: 2.
OZ123702.1:21598542-21598563
GATGTATAAAAGTGGTATTGTGTGGGAAAA21598542AAGGTTGAAAATGGAAAATGGAAAATAAGTTGACCAAAGGGGAGTAAGTTAA
Solanum nigrum genome assembly, chromosome: 21.
OZ176032.1:1540216-1540237
TGAATATATAAATCTTGTCGACGAGAATAA1540216AAGGTTGAAAATGGAAAATGGAGTCCTTAGCTCTGAACTTTCACTCATGAAA
Calliphora vomitoria genome assembly, chromosome: 1.
OW818029.2:173321676-173321697
TTGATTTTCCTGTTTTTCCTATTCAAACTC173321676AAGGTTGAAAATGGAAAATGGAACGGAATGAAAAACGTATATATACAGTGGT
Chrysolina oricalcia genome assembly, chromosome: 3.
OX101811.2:17813997-17814018
TAATGGATTTTTTGACGTTATGCAAAAAAA17813997AAGGTTGAAAATGGAAAATGGAATATTACATGATGATCGTTCTTGATTTATG
Acronicta leporina genome assembly, chromosome: 4.
OX366515.1:1071842-1071863
ACATGATAAGACCTTCGTAACCACACCACA1071842AAGGTTGAAAATGGAAAATGGAAATGTTCATTATTATTAGATTATGACTCGA
Crioceris asparagi genome assembly, chromosome: 1.
OY293826.1:120831507-120831528
CAAGTCTGGAAAACAGCCAGTTGTTAAGGA120831507AAGGTTGAAAATGGAAAATGGAGGTCGAGCTAAATTGAAGCAACAAATACTT
Sycon ciliatum genome assembly, chromosome: 6.
OZ025897.1:32217448-32217469
GTTGAATATCATTATTTCAGAATTGCCCGA32217448AAGGTTGAAAATGGAAAATGGAACGAGAGAATTGTATATATGGTGTTCAGGA
Sycon ciliatum genome assembly, chromosome: 6.
OZ025897.1:32240642-32240663
GTTGAATATCATTATTTCAGAATTGCCCGA32240642AAGGTTGAAAATGGAAAATGGAACGAGAGAATTGTATATATGGTGTTCAGGA
Sycon ciliatum genome assembly, chromosome: 6.
OZ025897.1:32245799-32245820
GTTGAATATCATTATTTCAGAATTGCCCGA32245799AAGGTTGAAAATGGAAAATGGAACGAGAGAATTGTATATATGGTGTTCAGGA
Orygma luctuosum genome assembly, chromosome: 3.
OZ243002.1:22964010-22964031
AAGGGGAAAATTTTAATTTAAATTGAGCAG22964010AAGGTTGAAAATGGAAAATGGAAAAAAAAAATTAATCGATACAAAGGGTACA
Orygma luctuosum genome assembly, chromosome: 3.
OZ243009.1:20805554-20805575
AAGGGGAAAATTTTAATTTAAATTGAGCAG20805554AAGGTTGAAAATGGAAAATGGAAAAAAAAAATTAATCGATACAAAGGGTACA
Orygma luctuosum genome assembly, chromosome: 5.
OZ244632.1:24504644-24504665
AAGGGGAAAATTTTAATTTAAATTGAGCAG24504644AAGGTTGAAAATGGAAAATGGAAAAAAAAAATTAATCGATACAAAGGGTACA
Apogon imberbis genome assembly, chromosome: 5.
OZ125156.1:15480847-15480868
GAGTGAAGTATTTTACACAGAAAACTGAAA15480847AAGGTTGAAAATGGAAAATGGACAGATAAGAAAAGGCAGGAGATTTTGCAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCATTTTCCATTTTCAACCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCATTTTCCATTTTCAACCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.047 | 1.038 | search_plus_done; http://172.18.8.135:50900/match?q=TCCATTTTCCATTTTCAACCTT&k=0&no_gap=0&offset=0&limit=50
2.405 | 1.359 | search_minus_done; http://172.18.8.135:50900/match?q=AAGGTTGAAAATGGAAAATGGA&k=0&no_gap=0&offset=0&limit=5
2.425 | 0.020 | cgi_end;

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