GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 18:22:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS08P01.
HX941731.1:154-173
TTCCGCTCCCGTCAAGTCCCAACTGTACAA154TCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTC
Vigna angularis mRNA, clone: VEPS10_C05.
HX942160.1:181-200
TTCCGCTCCCGTCAAGTCCCAACTGTACAA181TCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTC
Vigna angularis mRNA, clone: VES10I09.
HX946056.1:200-219
TTCCGCTCCCGTCAAGTCCCAACTGTACAA200TCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTC
Vigna angularis mRNA, clone: VES16I03.
HX948313.1:154-173
TTCCGCTCCCGTCAAGTCCCAACTGTACAA154TCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTC
Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
AP015035.1:4513058-4513077
TTCCGCTCCCGTCAAGTCCCAACTGTACAA4513058TCCCAACCGTCAAGTTTACCGACCGCAATCCCATTACCACCGCCGAGGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCCAACCGTCAAGTTTACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCAACCGTCAAGTTTACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.485 | 0.476 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCAACCGTCAAGTTTACC&k=0&no_gap=0&offset=0&limit=50
0.503 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GGTAAACTTGACGGTTGGGA&k=0&no_gap=0&offset=0&limit=45
0.503 | 0.000 | cgi_end;

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