GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 15:27:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2010512141-A/839: TRANSCRIPTION FACTORS.
FW352457.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
Sequence 1693 from patent US 7507875.
GP284788.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
Sequence 1693 from patent US 8110723.
GZ147814.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
Sequence 1693 from Patent EP1639089.
HH971904.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
Sequence 1693 from patent US 8962947.
HK479698.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
JP 2011087577-A/839: TRANSCRIPTION FACTORS.
HV336745.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC
JP 2011229530-A/839: TRANSCRIPTION FACTORS.
HV545483.1:34-57
TCTTTTTCTTTTTTCTAACACTTGGTATCT34TCCCACACACCCCCACTTAACCTGAAGATTGCTTTAACCTCACGTTTTTCTGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCCACACACCCCCACTTAACCTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCACACACCCCCACTTAACCTG | format : html | download : | debug : 

0.012 | 0.012 | search_start;
1.057 | 1.044 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCACACACCCCCACTTAACCTG&k=0&no_gap=0&offset=0&limit=50
1.075 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=CAGGTTAAGTGGGGGTGTGTGGGA&k=0&no_gap=0&offset=0&limit=43
1.075 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).