GGGenome | Results

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2025-04-09 05:26:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Arachis hypogaea DNA, clone: 8iHA03O13, cultivar: YI-0311.
DE998523.1:61-81

TTTTACTATTTGATTAAAGAGGAATAAAAT61TCCCACCTTTTCAGTTTAGCAATCTTTTTCTCTAGAAGAATCTTGATTTCA

Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:118879519-118879539

TGAAATCAAGATTCTTCTAGAGAAAAAGAT118879519TGCTAAACTGAAAAGGTGGGAATTTTATTACTCTTTAATCAAATAGTAAAA

Arachis hypogaea cultivar Shitouqi chromosome B03.
CP030995.1:120125889-120125909

TGAAATCAAGATTCTTCTAGAGAAAAAGAT120125889TGCTAAACTGAAAAGGTGGGAATTTTATTCCTCTTTAATCAAATAGTAAAA

Arachis ipaensis cultivar K30076 chromosome 03.
CP049894.1:117919819-117919839

TGAAATCAAGATTCTTCTAGAGAAAAAGAT117919819TGCTAAACTGAAAAGGTGGGAATTTTATTCCTCTTTAATCAAATAGTAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCACCTTTTCAGTTTAGCA&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTAAACTGAAAAGGTGGGA&k=0&no_gap=0&offset=0&limit=49
0.157 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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