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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 19:45:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ciona savignyi cDNA, clone:csef025m19, 5'end, single read.
BW575903.1:323-340
ACCAAGTGGACGCTTACAACTTCTACATCT323TCCCATTTCGTTCGTCGTTTGCAGGAGTTCCTGATCGCATATTCTCCT
39RDBRT_UP_044_G06_21JUL2004_036 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX272770.1:3-20
TT3TCCCATTTCGTTCGTCGTCGTCGTACATCTCTCTCTCTAGCTCTAGCT
36RDBRG_UP_104_H11_20JAN2006_081 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
ES931553.1:29-46
GGACTCAGGTGATCGGATCCTCTCTGTT29TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
39RDBRT_UP_093_A03_25JAN2006_031 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
ES937205.1:4-21
GTT4TCCCATTTCGTTCGTCGTCGTCGTACTCGTACATCTCTCTCTCTCGCT
40JKME7D_UP_048_C01_21JUN2006_011 40JKME7D Brassica napus cDNA 5', mRNA sequence.
ES981542.1:5-22
GGTT5TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
MMN2_1812 Brassica rapa mature median nectary, normalized (MMN2) Brassica rapa cDNA similar to cytochrome c oxidase subunit Vc family protein / COX5C family protein, mRNA sequence.
GR727195.1:2-19
G2TCCCATTTCGTTCGTCGTCGTCGTACATCTCTCTCTCTAGCTCTAGCT
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:38162389-38162406
GATGACTCAGGTGATCGGATCCTCTCTGTT38162389TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
Brassica napus genome assembly, chromosome: A07.
HG994361.1:19724144-19724161
GATGACTCAGGTGATCGGATCCTCTCTGTT19724144TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
Brassica napus genome assembly, chromosome: C06.
HG994370.1:31932959-31932976
GATGACTCAGGTGATCGGATCCTCTCTGTT31932959TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
Brassica rapa genome, scaffold: A07.
LR031574.1:18664626-18664643
GATGACTCAGGTGATCGGATCCTCTCTGTT18664626TCCCATTTCGTTCGTCGTCGTCGTACATCTCTCTCTCTAGCTCTAGCT
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:28608504-28608521
GATGACTCAGGTGATCGGATCCTCTCTGTT28608504TCCCATTTCGTTCGTCGTCGTCGTCGTACATCTCTCTCTCGCTCTCGC
Triticum aestivum genome assembly, chromosome: 2B.
LR865462.1:683705261-683705278
TGCACTTCAACCAATTATAAACGTCAAGGC683705261TCCCATTTCGTTCGTCGTCCTCCCGTCCTGCCTCCCCACGTAACCTAC
Digitaria exilis genome assembly, chromosome: 1A.
LR994604.1:35400487-35400504
GCATGCATGCGTTGCACACCTCCTCGCCAT35400487TCCCATTTCGTTCGTCGTCACGCGTTAGAGCTAGCTAGCCGTTCCTCT
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:18955934-18955951
GATGACTCAGGTGATCGGATCCTCTCTGTT18955934TCCCATTTCGTTCGTCGTCGTCGTACATCTCTCTCTCTAGCTCTAGCT
Cenchrus americanus genome assembly, chromosome: PMC23DB2.
OX387240.1:250811004-250811021
TGAACGTTTCCACAAGTATTTTTTTTGCCC250811004TCCCATTTCGTTCGTCGTGCGTGCCACCGGTCCACACGCTCGTATCGT
Cenchrus americanus genome assembly, chromosome: Pg2.
OZ001398.1:266882128-266882145
TGAACGTTTCCACAAGTATTTTTTTTGCCC266882128TCCCATTTCGTTCGTCGTGCGTGCCACCGGTCCACACGCTCGTATCGT
Cenchrus americanus genome assembly, chromosome: Pg2.
OZ001406.1:272360820-272360837
TGAACGTTTCCACAAGTATTTTTTTTGCCC272360820TCCCATTTCGTTCGTCGTGCGTGCCACCGGTCCACACGCTCGTACTAT
Mycobacterium branderi JCM 12687 DNA, nearly complete genome.
AP022606.1:317755-317772
CGTCGGCGAGAACTTCTCCCGTCGCTTCGT317755TCCCATTTCGTTCGTCGTCTCGGCGATCACCCTGGCGATCACCGGCGA
Autographa pulchrina genome assembly, chromosome: 14.
FR997776.1:6493994-6494011
TGCTGCTCAGTACGATGCATTTCAGAACAA6493994TCCCATTTCGTTCGTCGTGGAAACCACTTATAAGGATTGGAACACCGA
Cosmia trapezina genome assembly, chromosome: 13.
LR991032.1:14600938-14600955
AGCAGCCCAGTACGATGCTTTCCAGAACAA14600938TCCCATTTCGTTCGTCGTGGAGACAACCTACAAGGACTGGAACACAGA
Lasioglossum lativentre genome assembly, chromosome: 6.
OU744360.1:14986783-14986800
CGCGGAGGTGTTCTCTCTACCTGTCCGAGG14986783TCCCATTTCGTTCGTCGTGCGCGCACCTAGCCGCCACTACTCCCGACA
Pemphredon lugubris genome assembly, chromosome: 4.
OW121818.1:10254860-10254877
TAGCTCTTGGTAAGAGCACATCGTACCACC10254860TCCCATTTCGTTCGTCGTGCTGCCAGCCGGACGGCTGTTAGGTGTACT
Orthosia gracilis genome assembly, chromosome: 11.
OX387275.1:32573922-32573939
CGCCGCCCAGTACGATGCCTTCCAGAACAA32573922TCCCATTTCGTTCGTCGTGGAGACTACCTACAAGGATTGGAACACAGA
Dicycla oo genome assembly, chromosome: 14.
OX411723.1:16384181-16384198
AGCAGCCCAGTACGATGCTTTCCAGAACAA16384181TCCCATTTCGTTCGTCGTGGAGACAACCTACAAGGACTGGAACACAGA
Thalpophila matura genome assembly, chromosome: 13.
OX419189.1:8958932-8958949
CGCTGCCCAGTACGATGCCTTCCAGAACAA8958932TCCCATTTCGTTCGTCGTGGAGACGACCTACAAGGATTGGAACACAGA
Chalcis sispes genome assembly, chromosome: 1.
OX465094.1:5604044-5604061
TGAAGAACCAAATCGCATTATTTTATTTTT5604044TCCCATTTCGTTCGTCGTTTCTTTTTTCCGCTCGAATGATACATCGGT
Andrena trimmerana genome assembly, chromosome: 2.
OX578060.1:10084522-10084539
GCACGCGGTTGCCTTTCTTCTTGTATATCG10084522TCCCATTTCGTTCGTCGTGAACGCCCCGCCGATTAAAAGCCGGCCGGC
Andrena carantonica genome assembly, chromosome: 2.
OX731549.1:9866813-9866830
GCACGCGGTTGCCTTTCTTCTTGTATATCG9866813TCCCATTTCGTTCGTCGTGAACGCCCCGCCGATTAAAAGCCGGCCGGC
Drosophila obscura genome assembly, chromosome: 2.
OY757202.1:7333410-7333427
AGCATTTCTGTCATTCGTTGTTCTGTCCTG7333410TCCCATTTCGTTCGTCGTTCGTCGTTCCCTGTTTCATTCAGTTCGTCT
Xiphydria camelus genome assembly, chromosome: 5.
OY783195.1:25642363-25642380
CAGCTGCAGAAGCACGACGACAGCGAGCGG25642363TCCCATTTCGTTCGTCGTTCGCGTTTGGCTGTCTTCCCTCTGCAACGA
Diogma glabrata genome assembly, chromosome: 3.
OY856188.1:61121574-61121591
TTACCCACAAAAAGAACTGATGGCTGGATT61121574TCCCATTTCGTTCGTCGTAGGTTTGTGGTAAGTGATACAAAGTGATAG
Tiliacea citrago genome assembly, chromosome: 16.
OY992796.1:14109105-14109122
CGCAGCCCAGTACGATGCTTTCCAGAACAA14109105TCCCATTTCGTTCGTCGTGGAGACAACCTACAAGGACTGGAACACAGA
TSA: Metaseiulus occidentalis MITE_454Assem.sd.9895.C1 mRNA sequence.
JL017627.1:357-374
GCCGATGAGCACGGCTATCACACGAAAATT357ACGACGAACGAAATGGGAACCGAATCTCAGAGTCCGGCCGACGTCCAA
KBrB097A21R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB097A21, genomic survey sequence.
ED513181.1:109-126
AGCTAGAGCTAGAGAGAGAGATGTACGACG109ACGACGAACGAAATGGGAAACAGAGAGGATCCGATCACCTGAGTCATC
Rhizoctonia solani strain AG-1 IA isolate XN chromosome 16.
CP059673.1:3172542-3172559
AATATCGTGTTTCTCTGACTTCGTGGAAGA3172542ACGACGAACGAAATGGGACCAAGGGTGGTGGAAACGCGTTGTCTCTCC
Rhizoctonia solani strain AG1-IA_HG81 chromosome 16.
CP102658.1:3333918-3333935
AATATCGTGTTTCTCTGACTTCGTGGAAGA3333918ACGACGAACGAAATGGGACCAAGGGTGGTGGAAACGCGTTGTCTCTCC
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:9918420-9918437
AGCGAGAGAGAGAGATGTACGAGTACGACG9918420ACGACGAACGAAATGGGAAACAGAGAGGATCCGATCACCTGAGTCATC
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 6.
CP124714.1:17364532-17364549
ACAGCAGCCTCCGACGACTTTCAACCTCCG17364532ACGACGAACGAAATGGGAACACAACAAATGGTATTTCTTCTGTTACTG
Triticum aestivum genome assembly, chromosome: 2B.
LR862533.1:575822569-575822586
GTAGGTTACGTGGGGAGGCAGGACGGGAGG575822569ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
LR862554.1:700587599-700587616
GTAGGTTACGTGGGGAGGCAGGACGGGAGG700587599ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
LR865504.1:683413651-683413668
GTAGGTTACGTGGGGAGGCAGGACGGGAGG683413651ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
LR865743.1:692885232-692885249
GTAGGTTACGTGGGGAGGCAGGACGGGAGG692885232ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
LR865764.1:689741537-689741554
GTAGGTTACGTGGGGAGGCAGGACGGGAGG689741537ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
LR877313.1:687246823-687246840
GTAGGTTACGTGGGGAGGCAGGACGGGAGG687246823ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum turgidum subsp. durum genome assembly, chromosome: 2B.
LT934114.1:678825697-678825714
GTAGGTTACGTGGGGAGGCAGGACGGGAGG678825697ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Brassica napus microsatellite HYSSR96 sequence.
MZ245446.1:355-372
GCGAGAGCGAGAGAGAGATGTACGACGACG355ACGACGAACGAAATGGGAAACAGAGAGGATCCGATCACCTGAGTCATC
Triticum aestivum genome assembly, chromosome: 2B.
OU343177.1:705214753-705214770
GTAGGTTACGTGGGGAGGCAGGACGGGAGG705214753ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
OU963876.1:677823222-677823239
GTAGGTTACGTGGGGAGGCAGGACGGGAGG677823222ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 2B.
OX082598.1:584648682-584648699
GTAGGTCACGTGGGGAGGCAGGACGGGAGG584648682ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum aestivum genome assembly, chromosome: 2B.
OX637229.1:591987393-591987410
GTAGGTTACGTGGGGAGGCAGGACGGGAGG591987393ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Triticum timopheevii genome assembly, chromosome: 2G.
OY997264.1:576661634-576661651
GTAGGTTACGTGGGGAGGCAGGACGGGAGG576661634ACGACGAACGAAATGGGAGCCTTGACGTTTATAATTGGTTGAAGTGCA
Marinobacter salarius strain R9SW1, complete genome.
CP007152.1:1137283-1137300
GCAGAATCAGCCGGTCAAATCGCTTTGACG1137283ACGACGAACGAAATGGGAGCAAAGCCAATCTGATTCCCTCGGTCTGTG
Marinobacter salarius strain SMR5 chromosome, complete genome.
CP020931.1:321154-321171
GCAGAATCAGCCGGTCAAATCGCTTTGACG321154ACGACGAACGAAATGGGAGCAAAGCCAATCTGATTCCCTCGGTCTGTG
Ochropleura plecta genome assembly, chromosome: 13.
FR997735.1:10386934-10386951
TCGGTGTTCCAGTCCTTGTAGGTTGTCTCC10386934ACGACGAACGAAATGGGATTGTTCTGGAAAGCGTCGTACTGGGCTGCG
Omphaloscelis lunosa genome assembly, chromosome: 14.
OU744257.1:10739379-10739396
TCTGTGTTCCAGTCCTTGTAGGTTGTCTCC10739379ACGACGAACGAAATGGGATTGTTCTCAAAAGCATCGTACTGAGCTGCG
Pemphredon lugubris genome assembly, chromosome: 2.
OW121816.1:7493693-7493710
ACGAGGCGAGATAGAGTCGTGGAAAAACGG7493693ACGACGAACGAAATGGGAGAGAGAGAGAGAGGAAAGAAGCACAGCCCA
Cosmia pyralina genome assembly, chromosome: 13.
OX276354.1:13224167-13224184
TCTGTGTTCCAATCCTTGTAGGTTGTCTCC13224167ACGACGAACGAAATGGGATTGTTCTGGAAAGCATCGTACTGGGCTGCT
Tiliacea aurago genome assembly, chromosome: 10.
OX402586.1:13379611-13379628
TCTGTGTTCCAGTCCTTATAGGTTGTCTCC13379611ACGACGAACGAAATGGGATTGTTCTGGAAAGCATCGTACTGGGCTGCG
Nomada fucata genome assembly, chromosome: 1.
OX411275.1:29933554-29933571
GGGTTAAAGACGGTAGAGAGTCGCTAGAAG29933554ACGACGAACGAAATGGGAGACCGTTAACTGTTGCTCAGGACGGAAACG
Asteroscopus sphinx genome assembly, chromosome: 13.
OX453014.1:14400789-14400806
TCGGTGTTCCAATCCTTGTAGGTTGTTTCC14400789ACGACGAACGAAATGGGATTGTTTTGAAAGGCATCATACTGGGCTGCG
Ochropleura leucogaster genome assembly, chromosome: 14.
OY288214.1:8999950-8999967
TCGGTGTTCCAATCCTTGTAGGTTGTCTCC8999950ACGACGAACGAAATGGGATTGTTCTGGAAAGCGTCGTACTGGGCTGCG
Phengaris arion genome assembly, chromosome: 15.
OY751446.1:12930963-12930980
TTAGTGTCCCAGTCCTTATACGTGGTTTCC12930963ACGACGAACGAAATGGGATTGTTGTGGTATGCGTCGTACTGAGCTAGT
Drosophila obscura genome assembly, chromosome: 2.
OY757208.1:6111799-6111816
AGACGAACTGAATGAAACAGGGAACGACGA6111799ACGACGAACGAAATGGGACAAGACAGAACAACGAATGACAGAAATGCT
Clivina fossor genome assembly, chromosome: 3.
OZ014553.1:10956261-10956278
TTTCTAAATCGAAGAACCAATTGCGATAGA10956261ACGACGAACGAAATGGGAATAAAGTGAGAGCAAAACGTAATCAATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCATTTCGTTCGTCGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCATTTCGTTCGTCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.514 | 0.505 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCATTTCGTTCGTCGT&k=0&no_gap=0&offset=0&limit=50
0.663 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=ACGACGAACGAAATGGGA&k=0&no_gap=0&offset=0&limit=18
0.684 | 0.021 | cgi_end;

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