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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:20:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 9.
OX460403.1:41632211-41632227
CTCCTCCTGTTCACCTCCCCCCCTTTTCCC41632211TCCCCCACGACCCATTCCTCAGAGAGAGTAAGTCCTCCCATGAGGAG
Peromyscus eremicus genome assembly, chromosome: 9.
OX460475.1:41813380-41813396
TTCCTCCTGTTCACCTCCCCCCCTTTTCCC41813380TCCCCCACGACCCATTCCTCAGAGAGAGTAAGTCCTCCCATGAGGAG
Sus scrofa scrofa breed NS chromosome 18.
CP071569.1:6744760-6744776
AGTGAAAATCCTGAAAATAGAAGCAGAGCA6744760TCCCCCACGACCCATTCAATACAGGCATGAAGAAATCCTTCCCTCTT
Sus scrofa genome assembly, chromosome: 18.
OY997225.1:14027513-14027529
AGTGAAAATCCTGAAAATAGAAGCAGAGCA14027513TCCCCCACGACCCATTCAATACAGGCATGAAGAAATCCTTCCCTCTT
Meleagris gallopavo genome assembly, chromosome: 1.
OW982252.1:1618591-1618607
GGAAAAGCACTGAGCCAACATCACCTCACC1618591TCCCCCACGACCCATTCATGTGTCCATAGGTGGAAGTGCCAGCCCAG
Meleagris gallopavo genome assembly, chromosome: 1.
OW982291.1:1593794-1593810
GGAAAAGCACTGAGCCAACATCACCTCACC1593794TCCCCCACGACCCATTCATGTGTCCATAGGTGGAAGTGCCAGCCCAG
Zeus faber genome assembly, chromosome: 2.
OY482846.1:48750058-48750074
TTGCTAAGAGGATGAGGAAACGTGTCATTA48750058TCCCCCACGACCCATTCCCCTCACGCTCCCTCGGATCTCCCACCCTT
Mobula hypostoma genome assembly, chromosome: 20.
OY992612.1:56854692-56854708
GCTCCCTCTGGTGCTCCTCCTTCTTCCCTT56854692TCCCCCACGACCCATTCTCATCTCCCATCAGATTCCTTCTTCTCTGA
Ciona savignyi cDNA, clone:cstb014k23, 3'end, single read.
BW569535.1:125-141
CGACTCTTAGTATCCGTACCCTCGTCCGAA125TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGTG
Ciona savignyi cDNA, clone:csef011b05, 3'end, single read.
BW580857.1:122-138
CGACTCTTAGTATCCGTACCCTCGTCCAAA122TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGGG
Ciona savignyi cDNA, clone:csef012j02, 3'end, single read.
BW581133.1:118-134
CGACTCTTAGTATCCGTACCCACGTCCAAA118TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGTG
Ciona savignyi cDNA, clone:csef015l09, 3'end, single read.
BW581717.1:121-137
CGACTCTTAGTATCCGTACCCTCGTCCGAA121TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGTG
Ciona savignyi cDNA, clone:csef017l20, 3'end, single read.
BW582058.1:120-136
CGACTCTTAGTATCCGTACCCTCGTCCGAA120TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef022e12, 3'end, single read.
BW582795.1:109-125
CGACTCTTAGTATCCGTACCCACGTCCGAA109TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef023k23, 3'end, single read.
BW583017.1:117-133
CGACTCTTAGTATCCGTACCCGCGTCCGAA117TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef024g17, 3'end, single read.
BW583128.1:105-121
CGACTCTTAGTATCCGTACCCGCGTCCGAA105TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef024n02, 3'end, single read.
BW583192.1:80-96
GCGACTCTTATATCCGNACCCTCGTNCGAA80TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCGGGGGGTG
Ciona savignyi cDNA, clone:csef042n03, 3'end, single read.
BW585483.1:117-133
CGACTCTTAGTATCCGTACCCACGTCCGAA117TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGTG
Ciona savignyi cDNA, clone:csef045m10, 3'end, single read.
BW586203.1:108-124
CGACTCTTAGTATCCGTACCCACGTCCGAA108TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGAGGT
Ciona savignyi cDNA, clone:csef001j17, 3'end, single read.
BW591173.1:117-133
CGACTCTTAGTATCCGTACCCACGTCCAAA117TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef002k24, 3'end, single read.
BW591425.1:32-48
GACTTTTAGTATCCGTACCCCGCGTCCAAA32TCCCCCACGACCCATTCCTGGGGNGANGGTCCCCTCATACCAGGGGG
Ciona savignyi cDNA, clone:csef003c05, 3'end, single read.
BW591552.1:149-165
CGACTCTTAGTATCCGTACCCGCGTCCGAA149TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef004j07, 3'end, single read.
BW591906.1:154-170
CGACTCTTAGTATCCGTACCCTCGTCCGAA154TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef006d19, 3'end, single read.
BW592298.1:154-170
CGACTCTTAGTATCCGTACCCTCGTCCGAA154TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGAGGTG
Ciona savignyi cDNA, clone:csef007l14, 3'end, single read.
BW592649.1:138-154
CGACTCTTAGTATCCGTACCCTCGTCCGAA138TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Ciona savignyi cDNA, clone:csef028b04, 3'end, single read.
BW593631.1:136-152
CGACTCTTAGTATCCGTACCCGCGTCCGAA136TCCCCCACGACCCATTCCTGGGGGAGGTCCCCTCATACCAGGGGGTG
Bombus terrestris EST, 5' end sequence, clone bom001noP0001N16.
FN611346.1:213-229
GCAGACTAGGCTCCATAGAAACTACAGTCT213TCCCCCACGACCCATTCACAGAAGAAACAGTGAAAGAAATCGAATCT
TSA: Bombus terrestris a10886.btermhead mRNA sequence.
JL648609.1:1520-1536
GCAGACTAGGCTCCATAGAAACTACAGTCT1520TCCCCCACGACCCATTCACAGAAGAAACAGTGAAAGAAATCGAATCT
TSA: Bombus terrestris a8344.bterqova mRNA sequence.
JL800744.1:1552-1568
GCAGACTAGGCTCCATAGAAACTACAGTCT1552TCCCCCACGACCCATTCACAGAAGAAACAGTGAAAGAAATCGAATCT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-220O9.
FP236671.3:124901-124917
AGTGAAAATCCTGAAAATAGAAGCAGAGCA124901TCCCCCACGACCCATTCAATACAGGCATGAAGAAATCCTTCCCTCTT
Elaeis guineensis microsatellite DNA, clone mEgCIR0465.
AJ271940.1:257-273
TATAAATGCGGCTCCTGACGCCCTCCCCCT257TCCCCCACGACCCATTCCACCAAGCTATTCTTCTCTCCTCCTCTCTC
Fusarium oxysporum f. sp. koae isolate 44 chromosome 11.
CP052905.1:1389580-1389596
ACTGTAACAAGATGATCTAGGCTACCATTC1389580TCCCCCACGACCCATTCCCGATATTTTCCATCATTCATCATAAGACT
Fusarium verticillioides isolate ITEM 10027 chromosome 10.
CP079913.1:1290302-1290318
ACTACTGTAACATGATCTAGGCTATCAATC1290302TCCCCCACGACCCATTCACAAAATTTTCCATCATTCATCATAAGGCT
Fusarium falciforme strain Fu3.1 chromosome 9.
CP104058.1:1940032-1940048
CATCCGCAACTTCAGCATCTGTCTCGCAAC1940032TCCCCCACGACCCATTCTTCAACCAGCCCTTCTTCAACGACTCTGCC
Fusarium verticillioides strain 7600 chromosome 10.
CP114050.1:1272554-1272570
ACTACTGTAACATGATCTAGGCTATCAATC1272554TCCCCCACGACCCATTCCCAAAATTTTCCATCATTCATCATAAGGCT
Fusarium oxysporum f. sp. cubense strain race 4 chromosome 11.
CP115885.1:1578266-1578282
ACTGTAACAAAATGATCTAGGCTACCATTC1578266TCCCCCACGACCCATTCCCAATATTTTCCATCATTCATCATAAGACT
Fusarium oxysporum strain Fo5176 chromosome 15.
CP128286.1:1622428-1622444
ACTGTAACAAGATGATCTAGGCTGCCATTC1622428TCCCCCACGACCCATTCCCAATATTTTCCATCACTCATCATAAGACT
Cucumis melo genomic scaffold, anchoredscaffold00004.
LN681928.1:6353382-6353398
AAATGCTTAGTCAAGCATGAGCTTTAGGTC6353382TCCCCCACGACCCATTCCAAGGACCAAAAGTTTTTCTGTTTTTAAAA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828113.1:91394804-91394820
GGATAACCTCCCCGAGCATGGCCCTATCCA91394804TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828144.1:102976850-102976866
GGATAACCTCCCCGAGCATGGCCCTATCCA102976850TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828278.1:101878439-101878455
GGATAACCTCCCCGAGCATGGCCCTATCCA101878439TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OU015706.1:97480222-97480238
GGATAACCTCCCCGAGCATGGCCCTATCCA97480222TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Avena insularis genome assembly, chromosome: 1C.
OU342338.1:131144401-131144417
TGAAGAGCTCGGTCTCCTTGATGGCGGTTT131144401TCCCCCACGACCCATTCATGACGCGCGAGCCCGCGCCCTTCTTCTTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460010.1:100917386-100917402
GGATAACCTCCCCGAGCATGGCCCTATCCA100917386TCCCCCACGACCCATTCCTCCCCTCTCCTCTCAGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460024.1:99110746-99110762
GGATAACCTCCCCGAGCATGGCCCTATCCA99110746TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460045.1:98225529-98225545
GGATAACCTCCCCGAGCATGGCCCTATCCA98225529TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460051.1:218765989-218766005
TCCTTGTCGCACTAGCCGCAAAAGGGATAA218765989TCCCCCACGACCCATTCCATCTCTCTCCCTCTCCCCATTCGCTCCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460073.1:102431931-102431947
GGATAACCTCCCCGAGCATGGCCCTATCCA102431931TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460171.1:98817887-98817903
GGATAACCTCCCCGAGCATGGCCCTATCCA98817887TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460206.1:102578960-102578976
GGATAACCTCCCCGAGCATGGCCCTATCCA102578960TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460220.1:103064859-103064875
GGATAACCTCCCCGAGCATGGCCCTATCCA103064859TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460255.1:102215374-102215390
GGATAACCTCCCCGAGCATGGCCCTATCCA102215374TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460262.1:97334733-97334749
GGATAACCTCCCCGAGCATGGCCCTATCCA97334733TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460297.1:101212480-101212496
GGATAACCTCCCCGAGCATGGCCCTATCCA101212480TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460311.1:97767579-97767595
GGATAACCTCCCCGAGCATGGCCCTATCCA97767579TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 6H.
OX590760.1:99277038-99277054
GGATAACCTCCCCGAGCATGGCCCTATCCA99277038TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590767.1:97666030-97666046
GGATAACCTCCCCGAGCATGGCCCTATCCA97666030TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638775.1:101908058-101908074
GGATAACCTCCCCGAGCATGGCCCTATCCA101908058TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638789.1:101305141-101305157
GGATAACCTCCCCGAGCATGGCCCTATCCA101305141TCCCCCACGACCCATTCCTCCCCTCTCCACTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638803.1:101288633-101288649
GGATAACCTCCCCGAGCATGGCCCTATCCA101288633TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:97749255-97749271
GGATAACCTCCCCGAGCATGGCCCTATCCA97749255TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638824.1:103842775-103842791
GGATAACCTCCCCGAGCATGGCCCTATCCA103842775TCCCCCACGACCCATTCCTCCCCTCTCCTCTCGGTTGCTCTGTTCCC
Mesorhizobium sp. NBSH29 chromosome, complete genome.
CP045492.1:3378172-3378188
ACAGATTGTCCATGAATTCCTCCCCAGGGG3378172TCCCCCACGACCCATTCCTCCTCACGGAACATTTGTATCCCGCGATT
Rhodococcus fascians A21d2 chromosome, complete genome.
CP049748.1:4962313-4962329
CGAGGAAGTGCTCGTCGAGTCGCCGCCCAT4962313TCCCCCACGACCCATTCCGCCCGAGACATAGTACGCCACTTCGTGGT
Lysobacter sp. S4-A87 chromosome, complete genome.
CP093341.1:1535431-1535447
GCCTTTTTCCCCTGCATGCCCCAGATCGAA1535431TCCCCCACGACCCATTCCGGCGCCATCGCCTTCATTGGCGGCGGCAA
Macrobrachium nipponense isolate FS-2020 chromosome 13.
CP062031.1:70743003-70743019
CTCAGAATTTAATCAAACCTCCATCCTTCG70743003TCCCCCACGACCCATTCTGCAAATGTGTCTTCAAATAAAAGATACTT
Bombus terrestris genome assembly, chromosome: 16.
OU342936.1:4237287-4237303
GCAGACTAGGCCCCATAGAAACTACAGTCT4237287TCCCCCACGACCCATTCACAGAAGAAACAGTGAAAGAAATCGAATCT
Bombus hypnorum genome assembly, chromosome: 3.
OU427022.1:4232677-4232693
GCAGACTAGGCTCCATAGAAACTACAGTCT4232677TCCCCCACGACCCATTCACAGAAGAAACAGTGAAAGAAATCGAATCT
Polydrusus cervinus genome assembly, chromosome: 8.
OW284517.1:30775378-30775394
GTCGGGGGATCTAGCTGGCCATGACTCTGT30775378TCCCCCACGACCCATTCAGCTATTATTAAAGTTTTAATCTAAATATT
Glyphotaelius pellucidus genome assembly, chromosome: 4.
OW386540.1:16223400-16223416
GCGGCGTGGGCACACAATCCCCACAACCCA16223400TCCCCCACGACCCATTCCCCACAACCCACCGGGGGAATAGATAGAGA
Sabethes cyaneus genome assembly, chromosome: 2.
OX030888.1:79565786-79565802
TCGCAGTTAATTCAATGGCACCATGGATGT79565786TCCCCCACGACCCATTCATATCTTCTTCTTTTTCTACCTGTTGTTCT
Xanthorhoe spadicearia genome assembly, chromosome: 16.
OX352210.1:3920219-3920235
GATAAGAATAGGCCTAGCATGCTCGGAAGT3920219TCCCCCACGACCCATTCTATGACAGCGGCTTATGTCACTTGCTGTGA
Andrena trimmerana genome assembly, chromosome: 5.
OX578063.1:11513432-11513448
GGCGGACTCGTGGCACAGCACCAAGTTAAT11513432TCCCCCACGACCCATTCCCTGGCATAGATTTGCGTGAACGGATTTCA
Caenorhabditis uteleia genome assembly, chromosome: V.
OY752137.1:15742649-15742665
ATTCATTCTAATCACATCCCCCCAAACTAG15742649TCCCCCACGACCCATTCGAATAATTTCAAATTCCAACTAGTTGTGAT
Pyrausta aurata genome assembly, chromosome: 5.
OY757256.1:10298267-10298283
CCTCGGCGCAAGAGCACCCCGCTCTCGCCT10298267TCCCCCACGACCCATTCCGCAGGCGAAGTCTCAGTGAAGCGGTTTAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCCCACGACCCATTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCCCACGACCCATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.924 | 0.916 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCCCACGACCCATTC&k=0&no_gap=0&offset=0&limit=50
1.062 | 0.138 | search_minus_done; http://172.18.8.135:50400/match?q=GAATGGGTCGTGGGGGA&k=0&no_gap=0&offset=0&limit=0
1.062 | 0.000 | cgi_end;

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