GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-21 05:34:22, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a010G05_SP6.
AM386447.1:89-108
CCGAACCAACATTTTAAATAACATTTATTA89TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
Brassica napus mRNA, clone: BdlSH192, expressed in excised vascular bundle.
CJ999431.1:138-157
CCGAACCAACATTTTAAATAACATTTATTA138TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
OL1371F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL1371, mRNA sequence.
EH414493.1:72-91
CCGAACCAACATTTTAAATAACATTTATTA72TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
OL436F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL436, mRNA sequence.
EH420267.1:59-78
CCGAACCAACATTTTAGATAACATTTATTA59TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
OL8760F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8760, mRNA sequence.
EH428709.1:67-86
CCGAACCAACATTTTCAATAACATTTATTA67TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0190787 Brassica napus Apical meristem Brassica napus cDNA, mRNA sequence.
EV093114.1:116-135
TTTTTTTTTTTTTTTAAATAACATTTATTA116TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTNTATGATAG
0193533 Brassica napus Apical meristem Brassica napus cDNA, mRNA sequence.
EV095532.1:74-93
CCGAACCAACATTTTAAATAACATTTATTA74TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0178520 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV098975.1:166-185
CCGAACCAACATTTTAAATAACATTTATTA166TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0183822 Brassica napus Leaf library Brassica napus cDNA, mRNA sequence.
EV103395.1:62-81
CCGAACCAACATTTTAAATAACATTTATTA62TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0098134 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV196981.1:106-125
CCGAACCAACATTTTAAATAACATTTATTA106TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0099655 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV198502.1:151-170
CCGAACCAACATTTTAAATAACATTTATTA151TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
0100806 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV199653.1:150-169
CCGAACCAACATTTTAAACAACATTTATTA150TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
0101609 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV200456.1:164-183
CCAAACCAACATTTTAAACAACATTTATTA164TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
0101651 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV200498.1:168-187
CCGAACCAACATTTTAAACAACATTTATTA168TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
0103244 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV202091.1:108-127
CCGAACCAACATTTTAAACAACATTTATTA108TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
0104456 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV203303.1:62-81
CCGAACCAACATTTTAAATAACATTTATTA62TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
BR042725 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-038E12 5', mRNA sequence.
EX058081.1:9-28
ATTTATTA9TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
BR113690 ovule and silique cDNA library KHOS Brassica rapa subsp. pekinensis cDNA clone KHOS-26H05 3', mRNA sequence.
EX129860.1:603-622
CCGAACCAACATTTTAAACAACATTTATTA603TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF02A06, 3'-end sequence.
FY068743.1:104-123
CCGAACCAACATTTTAAACAACATTTATTA104TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_54.
FX737254.1:72-91
CCGAACCAACATTTTAAACAACATTTATTA72TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
Brassica napus cultivar Xiang5A chromosome 8.
CP151903.1:15567241-15567260
CCGAACCAACATTTTAAACAACATTTATTA15567241TCCCGGCAAGACTACTTAGATAAACATGCTTGTTCATCAGATTTATGATA
Brassica napus cultivar Xiang5A chromosome 18.
CP151913.1:19777220-19777239
CCGAACCAACATTTTAAATAACATTTATTA19777220TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:17205841-17205860
CCGAACCAACATTTTAAATAACATTTATTA17205841TCCCGGCAAGACTACTTAGATAAACATTAACTTCAAAGATTTATGATAGC
Sequence 2129 from Patent WO2009037329.
GN119233.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 12984 from Patent WO2009037329.
GN130088.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 21167 from Patent EP2194140.
HC911014.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 2129 from patent US 8809059.
HK081183.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 12984 from patent US 8809059.
HK086537.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 21167 from patent US 8952217.
HK431164.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Sequence 60362 from patent US 8952217.
HK450520.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Bn01_01g05_A Bn01_AAFC_ECORC_transgenic_Brassica_napus_overexpressing_BNCBF17_co nstitutively_frost_tolerant Brassica napus cDNA clone Bn01_01g05, mRNA sequence.
BQ704761.1:516-535
GCTATCATAAATCTTTGAAGTTAATGTTTA516TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
58-E023405-021-020-C15-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022C1520Q, mRNA sequence.
CX191005.1:570-589
TATCATAAATCTGATGAACAAGCATGTTTA570TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-008C10, 3' end sequence.
DK518296.1:730-749
GCTATCATAAATCTTTGAAGTTAATGTTTA730TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-023G14, 3' end sequence.
DK524112.1:674-693
GCTATCATAAATCTTTGAAGTTAATGTTTA674TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-035B03, 3' end sequence.
DK528574.1:712-731
GCTATCATAAATCTTTGAAGTTAATGTTTA712TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-053K17, 3' end sequence.
DK535661.1:657-676
GCTATCATAAATCTTTGAAGTTAATGTTTA657TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-084K13, 3' end sequence.
DK547505.1:690-709
GCTATCATAAATCTTTGAAGTTAATGTTTA690TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-104A24, 3' end sequence.
DK554929.1:644-663
GCTATCATAAATCTTTGAAGTTAATGTTTA644TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-128G20, 3' end sequence.
DK564226.1:677-696
GCTATCATAAATCTTTGAAGTTAATGTTTA677TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica oleracea var. viridis mRNA, clone: KALE-128K16, 3' end sequence.
DK564317.1:699-718
GCTATCATAAATCTTTGAAGTTAATGTTTA699TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
EX20LIB5_UP_001_B10_10FEB2004_078 Brassica napus EX20LIB5 Brassica napus cDNA 5', mRNA sequence.
EE490286.1:333-352
GCTATCATAAATCTTTGAAGTTAATGTTTA333TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
EX4PLCL3_UP_018_E03_29APR2003_012 Brassica napus EX4PLCL3 Brassica napus cDNA 5', mRNA sequence.
EE504792.1:404-423
GCTATCATAAATCTTTGAAGTTAATGTTTA404TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
OL5373R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5373, mRNA sequence.
EH422175.1:513-532
GCTATCATAAATCTTTGAAGTTAATGTTTA513TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
0193615 Brassica napus Apical meristem Brassica napus cDNA, mRNA sequence.
EV095614.1:660-679
GCTATCATAAATCTTTGAAGTTAATGTTTA660TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
BR048485 etiolated mature leaf cDNA library KBLW Brassica rapa subsp. pekinensis cDNA clone KBLW-38F03 5', mRNA sequence.
EX063841.1:311-330
TATCATAAATCTGATGAACAAGCATGTTTA311TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
BR109109 mature green leaf cDNA library KHLM Brassica rapa subsp. pekinensis cDNA clone KHLM-53F08 5', mRNA sequence.
EX125279.1:730-749
TATCATAAATCTGATGAACAAGCATGTTTA730TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
BR110996 etiolated mature leaf cDNA library KHLW Brassica rapa subsp. pekinensis cDNA clone KHLW-22B08 5', mRNA sequence.
EX127166.1:590-609
TATCATAAATCTGATGAACAAGCATGTTTA590TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
MLN1_1826 Brassica rapa mature lateral nectary, non-normalized (MLN1) Brassica rapa cDNA similar to GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase, mRNA sequence.
GR718992.1:410-429
TATCATAAATCTGATGAACAAGCATGTTTA410TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_98.
FX698404.1:1415-1434
TATCATAAATCTGATGAACAAGCATGTTTA1415TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Brassica napus cultivar Xiang5A chromosome 7.
CP123882.1:14579280-14579299
TATCATAAATCTGATGAACAAGCATGTTTA14579280TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:34939304-34939323
GCTATCATAAATCTTTGAAGTTAATGTTTA34939304TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG
Brassica napus genome assembly, chromosome: A08.
HG994362.1:11693966-11693985
TATCATAAATCTGATGAACAAGCATGTTTA11693966TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Brassica rapa genome, scaffold: A08.
LR031575.1:10708615-10708634
TATCATAAATCTGATGAACAAGCATGTTTA10708615TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Brassica rapa genome assembly, chromosome: A08.
LS974624.2:16517318-16517337
TATCATAAATCTGATGAACAAGCATGTTTA16517318TCTAAGTAGTCTTGCCGGGATAATAAATGTTGTTTAAAATGTTGGTTCGG
Erodium moschatum genome assembly, chromosome: 5.
OZ202116.1:27034391-27034410
CCTGACTCCTGCTCCCTATGATGTACAAGC27034391TCTAAGTAGTCTTGCCGGGAGAAATGGATTGTAACACGTGATCCCGAGAA
Erodium moschatum genome assembly, chromosome: 5.
OZ202116.1:27035123-27035142
CCTGACTCCTGCTCCCCACGATGCACATGC27035123TCTAAGTAGTCTTGCCGGGAGCAATGAATTGTAACACGTGATCCCGAGAA
Brassica napus mRNA for plastidic glutamine synthetase isoform (BnGSL2).
Y12458.1:1429-1448
GCTATCATAAATCTTTGAAGTTAATGTTTA1429TCTAAGTAGTCTTGCCGGGATAATAAATGTTATTTAAAATGTTGGTTCGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCGGCAAGACTACTTAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCGGCAAGACTACTTAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.015 | 1.007 | search_plus_done; http://172.18.8.135:50800/match?q=TCCCGGCAAGACTACTTAGA&k=0&no_gap=0&offset=0&limit=50
1.925 | 0.909 | search_minus_done; http://172.18.8.135:50800/match?q=TCTAAGTAGTCTTGCCGGGA&k=0&no_gap=0&offset=0&limit=27
1.947 | 0.022 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).