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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:47:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vipera ursinii genome assembly, chromosome: 2.
OX365965.1:48973199-48973218
TCATTTATCCTCTGGCCTAGAAGATATTTA48973199TCCCGTGGAAAGAACAGAAGGGCTGTGCTGGCAAAGGAATAAGCCTGCAA
Sequence 6816 from patent US 7569389.
GP677361.1:1048-1067
CTTCATGAAGGTGAAGAGAGTTTGGTGGAT1048TCCCGTGGAAAGAACAGAAGTGAGGAACTTAGGCTGCATGTCATGCAGGA
Sequence 5147 from patent US 8183436.
GZ318204.1:1048-1067
CTTCATGAAGGTGAAGAGAGTTTGGTGGAT1048TCCCGTGGAAAGAACAGAAGTGAGGAACTTAGGCTGCATGTCATGCAGGA
Sequence 24028 from patent US 9012723.
HK587682.1:982-1001
CTTCATGAAGGTGAAGAGAGTTTGGTGGAT982TCCCGTGGAAAGAACAGAAGTGAGGAACTTAGGCTGCATGTCATGCAGGA
Macropus eugenii mRNA, clone: METC-020J04, 5'end sequence, expressed in testis.
FY659218.1:593-612
GCGGCCATAACAGGGGGTTTGGAGATGATG593TCCCGTGGAAAGAACAGAAGGTCTTTCCCA
Macropus eugenii mRNA, clone: METC-068H05, 5'end sequence, expressed in testis.
FY679623.1:748-767
GCGGCCATAACAGGGGGTTTGGAGATGATG748TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-074F16, 5'end sequence, expressed in testis.
FY681804.1:693-712
GCGGCCATAACAGGNGGTTTGGAGATGATG693TCCCGTGGAAAGAACAGAAGGTCTTTNCCAGTCCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-096O08, 5'end sequence, expressed in testis.
FY690223.1:748-767
GCGGCCATAACAGGGGGTTTGGAGATGATG748TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTT
Macropus eugenii mRNA, clone: METC-112B18, 5'end sequence, expressed in testis.
FY695926.1:347-366
GCGGCCATAACAGGGGGTTTGGAGATGATG347TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-115H01, 5'end sequence, expressed in testis.
FY697161.1:748-767
GCGGCCATAACAGGGGGTTTGGAGATGATG748TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-125L18, 5'end sequence, expressed in testis.
FY700991.1:693-712
GCGGCCATAACAGGGGGTTTGGAGATGATG693TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCC
Macropus eugenii mRNA, clone: METC-132E06, 5'end sequence, expressed in testis.
FY703417.1:748-767
GCGGCCATAACAGGGGGTTTGGAGATGATG748TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-165E01, 5'end sequence, expressed in testis.
FY715764.1:748-767
GCGGCCATAACAGGGGGTTTGGAGATGATG748TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTTCCTATCTCCTTGGAGAT
Macropus eugenii mRNA, clone: METC-210K04, 5'end sequence, expressed in testis.
FY732631.1:693-712
GCGGCCATAACAGGGGGTTTGGAGATGATG693TCCCGTGGAAAGAACAGAAGGTCTTTCCCAGTCCCTATCTCCTTGGAGAT
TSA: Strongylocentrotus purpuratus WHL22.334796.0 mRNA sequence.
JT096816.1:822-841
ACTCAAGAATGACCTGATTGGTGTCAAAGC822TCCCGTGGAAAGAACAGAAGAAGATTTCGAGGCAGGCGCCATGTACCATA
Strongylocentrotus purpuratus clone R3-51K1, WORKING DRAFT SEQUENCE, 20 unordered pieces.
AC181478.1:150708-150727
TGACAGGAATGACCTGATTGGTGTCAAAGC150708TCCCGTGGAAAGAACAGAAGAAGATTTCGAGGCAGGCGCCATGTACCATA
Strongylocentrotus purpuratus clone R3-3100G10, WORKING DRAFT SEQUENCE, 25 unordered pieces.
AC184601.1:116629-116648
TGACAGGAATGACCTGATTGGTGTCAAAGC116629TCCCGTGGAAAGAACAGAAGAAGATTTCGAGGCAGGCGCCATGTACCATA
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:491750-491769
CTTCATGAAGGTGAAGAGAGTTTGGTGGAT491750TCCCGTGGAAAGAACAGAAGTGAGGAACTTAGGCTGCATGTCATGCAGGA
GM830009A23F04 Gm-r1083 Glycine max cDNA clone Gm-r1083-3320 3', mRNA sequence.
BI969881.1:401-420
TCCTGCATGACATGCAGCCTAAGTTCCTCA401CTTCTGTTCTTTCCACGGGAATCCACCAAACTCTCTTCACCTTCATGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCGTGGAAAGAACAGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCGTGGAAAGAACAGAAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
1.678 | 1.669 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCGTGGAAAGAACAGAAG&k=0&no_gap=0&offset=0&limit=50
2.283 | 0.605 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCTGTTCTTTCCACGGGA&k=0&no_gap=0&offset=0&limit=32
2.284 | 0.001 | cgi_end;

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