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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:33:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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USDA-FP_00657 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00657 5', mRNA sequence.
BQ623566.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS01_05db04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05db04, mRNA sequence.
CB293233.1:489-508
ATGAGGTGGAGCTGGGTCTCACCATTGATC489TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_122000-660 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-54_E03 5', mRNA sequence.
CF507160.1:366-385
ATGAGGTGGAGCTGGGTCTCACCATTGATC366TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_122000-968 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-57_H03 5', mRNA sequence.
CF507467.1:170-189
ATGAGGTGGAGCTGGGTCTCACCATTGATC170TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_123000-287 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-60_E07 5', mRNA sequence.
CF507786.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
USDA-FP_124000-214 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-70_A05 5', mRNA sequence.
CF508711.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCR01_01N11_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa01N11, mRNA sequence.
CF828604.1:318-337
ATGAGGTGGAGCTGGGTCTCACCATTGATC318TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_02E12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E12, mRNA sequence.
CF836015.1:479-498
ATGAGGTGGAGCTGGGTCTCACCATTGATC479TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_04I12_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04I12, mRNA sequence.
CF837354.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06G23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G23, mRNA sequence.
CF838390.1:488-507
ATGAGGTGGAGCTGGGTCTCACCATTGATC488TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06K18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K18, mRNA sequence.
CF838468.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06G23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G23, mRNA sequence.
CF838734.1:488-507
ATGAGGTGGAGCTGGGTCTCACCATTGATC488TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS03_06K18_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06K18, mRNA sequence.
CF838811.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004258_E01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_E01 5', mRNA sequence.
CK934487.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004513_E06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E06 5', mRNA sequence.
CK937152.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CGF1004439_F05 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F05 5', mRNA sequence.
CK938681.1:27-46
GGGGGAGCTGGGTCTCACCATTGATC27TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS06_0004M18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004M18, mRNA sequence.
CN191227.1:466-485
ATGAGGTGGAGCTGGGTCTCACCATTGATC466TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS06_0004N19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0004N19, mRNA sequence.
CN191265.1:482-501
ATGAGGTGGAGCTGGGTCTCACCATTGATC482TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS07_18E07_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-18E07-J14-1-4.g, mRNA sequence.
CX044591.1:471-490
ATGAGGTGGAGCTGGGTCTCACCATTGATC471TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS09_46D12_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-46D12-H23-1-6.g, mRNA sequence.
CX052517.1:475-494
ATGAGGTGGAGCTGGGTCTCACCATTGATC475TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_12B09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12B09-D18-1-5.b, mRNA sequence.
CX069683.1:476-495
ATGAGGTGGAGCTGGGTCTCACCATTGATC476TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_12H02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12H02-P4-1-4.g, mRNA sequence.
CX069801.1:470-489
ATGAGGTGGAGCTGGGTCTCACCATTGATC470TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS08_23A12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-23A12-B23-1-4.g, mRNA sequence.
CX071650.1:466-485
ATGAGGTGGAGCTGGGTCTCACCATTGATC466TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05142E10SK FerrChloL1 Citrus clementina cDNA clone C05142E10, mRNA sequence.
CX296529.1:480-499
ATGAGGTGGAGCTGGGTCTCACCATTGATC480TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05807G11SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05807G11, mRNA sequence.
CX297026.1:468-487
ATGAGGTGGAGCTGGGTCTCACCATTGATC468TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05808D08SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05808D08, mRNA sequence.
CX297079.1:80-99
ATGAGGTGGAGCTGGGTCTCACCATTGATC80TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05810A11SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05810A11, mRNA sequence.
CX297228.1:236-255
ATGAGGTGGAGCTGGGTCTCACCATTGATC236TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C05810C05SK FerrChloR1 Citrus sinensis x Citrus trifoliata cDNA clone C05810C05, mRNA sequence.
CX297242.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C06023B07SK FlavCurFr1 Citrus clementina x Citrus tangerina cDNA clone C06023B07, mRNA sequence.
CX299500.1:153-172
ATGAGGTGGAGCTGGGTCTCACCATTGATC153TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS10_11F05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F05-L9-5.g, mRNA sequence.
CX671532.1:478-497
ATGAGGTGGAGCTGGGTCTCACCATTGATC478TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus unshiu mRNA, clone: ANT0756, 5'-end sequence, expressed in anther.
DC883924.1:503-522
ATGAGGTGGAGCTGGGTCTCACCATTGATC503TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus unshiu mRNA, clone: STG1045, 5'-end sequence, expressed in style.
DC898634.1:503-522
ATGAGGTGGAGCTGGGTCTCACCATTGATC503TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
UCRCS11_06J23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006J23, mRNA sequence.
DN621371.1:452-471
ATGAGGTGGAGCTGGGTCTCACCATTGATC452TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTN
CSAH-PNP1246A24 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246A24 5', mRNA sequence.
DR403717.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CSAA-PNP1239E24 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239E24 5', mRNA sequence.
DR404749.1:506-525
ATGAGGTGGAGCTGGGTCTCACCATTGATC506TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
KN0AAP3YL21FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261693.1:472-491
ATGAGGTGGAGCTGGGTCTCACCATTGATC472TCCCTATCATCGGCAACTTCCACCATTCCTCTCTCTAAGAAAGGAAAGTC
KN0AAP8YM10FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY271081.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
IC0AAA3DA04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275927.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C1410 Citrus sinensis flesh cDNA-AFLP Library Citrus sinensis cDNA clone ClC1410, mRNA sequence.
EL492496.1:156-175
ATGAGGTGGAGCTGGGTCTCACCATTGATC156TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Volcani_8_19_H6 Volcani08 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
EX448519.1:523-542
ATGAGGTGGAGCTGGGTCTCACCATTGATC523TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAGGAAAGGAGAGTTC
CS00-C1-101-073-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY665085.1:468-487
ATGAGGTGGAGCTGGGTCTCACCATTGATC468TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CS00-C3-701-104-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY708905.1:491-510
ATGAGGTGGAGCTGGGTCTCACCATTGATC491TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CS13-C1-001-011-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
EY756722.1:500-519
ATGAGGTGGAGCTGGGTCTCACCATTGATC500TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CR05-C1-100-023-G11-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY760116.1:489-508
ATGAGGTGGAGCTGGGTCTCACCATTGATC489TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
CR05-C1-100-096-D11-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY766241.1:533-552
ATGAGGTGGAGCTGGGTCTCACCATTGATC533TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
TS27-C2-300-094-H08-CT.F Sunki mandarin bark, greenhouse plant Citrus sunki cDNA, mRNA sequence.
EY891822.1:146-165
ATGAGGTGGAGCTGGGTCTCACCATTGATC146TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
IC0AAA3DA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA3DA04, mRNA sequence.
FC884028.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
C08037E06SK PhyRootCl1 Citrus reshni cDNA clone C08037E06, mRNA sequence.
FC919949.1:97-116
ATGAGGTGGAGCTGGGTCTCACCATTGATC97TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
KN0AAP8YM10FM1 TF Citrus clementina cDNA clone KN0AAP8YM10, mRNA sequence.
FC925602.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
KN0AAP7YD06FM1 TF Citrus clementina cDNA clone KN0AAP7YD06, mRNA sequence.
FC926615.1:481-500
ATGAGGTGGAGCTGGGTCTCACCATTGATC481TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:7089248-7089267
ATGAGGTGGAGCTGGGTCTCACCATTGATC7089248TCCCTATCATCGGCAACTTCACCATTCCTCTCTCTAAGAAAGGAGAGTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCCTATCATCGGCAACTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCCTATCATCGGCAACTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.787 | 2.778 | search_plus_done; http://172.18.8.135:50400/match?q=TCCCTATCATCGGCAACTTC&k=0&no_gap=0&offset=0&limit=50
2.856 | 0.069 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGTTGCCGATGATAGGGA&k=0&no_gap=0&offset=0&limit=0
2.856 | 0.000 | cgi_end;

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