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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 21:07:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene89173_NK1 mRNA sequence.
JV450010.1:266-285
GAATCCTATGAGGTGGCTCCCAAATCCTGG266TCCGAGGTGAGCAAAGTTCTTGAAGACCTCAAACCCACGCTCAACTCCCA
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:31577913-31577932
GAATCCTATGAGGTGGCTCCCAAATCCTGG31577913TCCGAGGTGAGCAAAGTTCTTGAAGACATCAAACCCACGCTCAACTCCCA
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:35286777-35286796
GAATCCTATGAGGTGGCTCCCAAATCCTGG35286777TCCGAGGTGAGCAAAGTTCTTGAAGACATCAAACCCACGCTCAACTCCCA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:28814674-28814693
GAATCCTATGAGGTGGCTCCCAAATCCTGG28814674TCCGAGGTGAGCAAAGTTCTTGAAGACCTCAAACCCACGCTCAACTCCGA
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:32215084-32215103
GAATCCTATGAGGTGGCTCCCAAATCCTGG32215084TCCGAGGTGAGCAAAGTTCTTGAAGACCTCAAACCCACGCTCAACTCCCA
TSA: Musa acuminata AAA Group Unigene53607_B1 mRNA sequence.
JV372839.1:76-95
TGGGAGTTGAGCGTGGGTTTGAGGTCTTCA76AGAACTTTGCTCACCTCGGACCAGGATTTGGGAGCCACCTCATAGGATTC
Musa troglodytarum cultivar karat chromosome 9.
CP097511.1:11950706-11950725
TGGGAGTTGAGCGTGGGTTTGAGGTCTTCG11950706AGAACTTTGCTCACCTCGGACCAGGATTTGGGAGCCGCCTCATAGGATTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCGAGGTGAGCAAAGTTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCGAGGTGAGCAAAGTTCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50400/match?q=TCCGAGGTGAGCAAAGTTCT&k=0&no_gap=0&offset=0&limit=50
0.317 | 0.118 | search_minus_done; http://172.18.8.135:50400/match?q=AGAACTTTGCTCACCTCGGA&k=0&no_gap=0&offset=0&limit=45
0.319 | 0.001 | cgi_end;

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