GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:23:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

021011KAIA009375HT (KAIA) Actinidia chinensis ripe fruit Actinidia chinensis cDNA clone KAIAA00937, mRNA sequence.
FG460140.1:223-242
ACTTGCAGATTGTGGGATATTAGAAACCTG223TCCGAGTCCGTGTCTGTACTCGAGGGAAGGATGGGTGCAATCAGAGCCAT
011204KAKA003926HT (KAKA) Dormant kiwifruit buds one day before hydrogen cyanamide treatment Actinidia deliciosa cDNA clone KAKAA00392, mRNA sequence.
FG467586.1:282-301
ACTTGCAGATTGTGGGACATTAGAAACCTG282TCCGAGTCCGTGTCTGTACTCGAGGGAAGGATGGGTGCAATCAGAGCCAT
020207KALA003011HT (KALA) Dormant kiwifruit buds three days after hydrogen cyanamide treatment Actinidia deliciosa cDNA clone KALAA00301, mRNA sequence.
FG472584.1:422-441
ACTTGCAGATTGTGGGACATTAGAAACCTG422TCCGAGTCCGTGTCTGTACTCGAGGGAAGGATGGGTGCAATCAGAGCCAT
020217KALA006314HT (KALA) Dormant kiwifruit buds three days after hydrogen cyanamide treatment Actinidia deliciosa cDNA clone KALAA00631, mRNA sequence.
FG475405.1:34-53
ACTTGCAGATTGTGGGACATTAGAAACCTG34TCCGAGTCCGTGTCTGTACTCGAGGGAAGGATGGGTGCAATCAGAGCCAT
011122KAJA001552HT (KAJA) Actinidia eriantha ripe fruit skin Actinidia eriantha cDNA clone KAJAA00155, mRNA sequence.
FG480145.1:297-316
ACTTGCAGATTGTGGGACATTAGAAACCTG297TCCGAGTCCGTGTCTGTACTCGAGGGAAGGATGGGTGCAATCAGAGCCAT
Alentia gelatinosa genome assembly, chromosome: 9.
OX465587.1:59510171-59510190
GGTATCATGGTGAGTGCCATGTACGAGGCC59510171AGTACAGACACGGACTCGGACATGGCGCTGACGGGCAAGGTGGTGGGGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCGAGTCCGTGTCTGTACT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCGAGTCCGTGTCTGTACT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.591 | 0.582 | search_plus_done; http://172.18.8.135:50400/match?q=TCCGAGTCCGTGTCTGTACT&k=0&no_gap=0&offset=0&limit=50
0.610 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=AGTACAGACACGGACTCGGA&k=0&no_gap=0&offset=0&limit=45
0.611 | 0.001 | cgi_end;

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