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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-17 15:39:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Orcinus orca genome assembly, chromosome: 11.
OW443371.1:92611659-92611678
CAGCGTCCGACAGGACACCGTGTGCCTCTC92611659TCCTCAACACACCCACACTCTTCTCAAGACTTCGCTCGTAACTGGTATGA
Delphinus delphis genome assembly, chromosome: 11.
OX465337.1:91935858-91935877
CAGCGTCCGAGAGGACACCGTGTGCCTCTC91935858TCCTCAACACACCCACACTCTTCTCAAGACTTCGCTCGTAACTGGTATGA
Trifolium repens mRNA, clone: WCC42h03_044, unspecified EST.
FY468972.1:106-125
AATCAAATGCTTCAAACCAAATATTCCATT106TCCTCAACACACCCACACTCTTTCAACAAATTTCCTTCCAATTTTAACCT
Trifolium repens mRNA, clone: WCT3_28, unspecified EST.
FY469674.1:98-117
AATCAAATGCTTCAAACCAAATATTCCATT98TCCTCAACACACCCACACTCTTTCAACAAATTTCCTTCCAATTTTAACCT
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:59846861-59846880
AATCAAATGCTTCAAACCAAATATTCCATT59846861TCCTCAACACACCCACACTCTTTCAACAAATTTCCTTCCAATTTTAACCT
Mamestra brassicae genome assembly, chromosome: 17.
LR991004.1:9974959-9974978
ATTGTAAGTGTTTGAGTGAGAGTGAGTGTG9974959TCCTCAACACACCCACACTCACTCAAGCACTATTGCTTTCAATCACATAT
Dolichovespula saxonica genome assembly, chromosome: 4.
OU426996.1:2926726-2926745
GGCACGCCCAAATTAAGTACAATGATCATG2926726TCCTCAACACACCCACACTCAATTATGAAATATTATTTGGATGCTCTCTT
Dolichovespula sylvestris genome assembly, chromosome: 4.
OU964964.1:3293944-3293963
GGCACGCCCAAATTAAGTACAATGATCTTG3293944TCCTCAACACACCCACACTCAATTATGAGATATTATTTGGATGCTCTCTT
Ceriagrion tenellum genome assembly, chromosome: X.
OY720638.1:26829013-26829032
GTCGCACCTATTTTTATCTCTTCTCACCTT26829013TCCTCAACACACCCACACTCCTTTTCCTTGACAAAGGTTGCTTTCACTAA
Lagenorhynchus albirostris genome assembly, chromosome: 11.
OX459083.1:10774397-10774416
TCATACCAGTTACGAGCGAAGTCTTGAGAA10774397GAGTGTGGGTGTGTTGAGGAGAGAGGCACACGGTGTCCTCTCGGACGCTG
Stenella coeruleoalba genome assembly, chromosome: 11.
OX596396.1:10568169-10568188
TCACACCAGTTACGAGCGAAGTCTTGAGAA10568169GAGTGTGGGTGTGTTGAGGAGAGAGGCACACGGTGTCCTCTCGGACGCTG
Globicephala melas genome assembly, chromosome: 10.
OY734049.1:10350084-10350103
TCACACCAGTTACGAGCGAAGTCTTGAGAA10350084GAGTGTGGGTGTGTTGAGGAGAGAGGCACACGGTGTCCTCTCGGACGCTG
Phocoena phocoena genome assembly, chromosome: 11.
OZ004768.1:10502779-10502798
TCACACCAGTTACGAGCGAAGTCTTGAGAA10502779GAGTGTGGGTGTGTTGAGGAGAGAGGCACACGGTGTCCTCTCGGACGCTG
Danio aesculapii genome assembly, chromosome: 3.
LR812517.1:7406652-7406671
GTGTTGACAGATTGTGAGGGCTGTGAGGAA7406652GAGTGTGGGTGTGTTGAGGAAGACTCTGAGGAAGAGTGTGTGTGTGTTGA
Zootoca vivipara genome assembly, chromosome: 16.
OY735918.1:39927301-39927320
ATTTTAAATGGCTTTTATCGCGGGTCGGCG39927301GAGTGTGGGTGTGTTGAGGATATGGACATATTGCCGGGGTGCAACTAGAG
Lepidonotus clava genome assembly, chromosome: 11.
OW387143.1:4146122-4146141
AGTGGGTGTGTTGAGGGAGGGGTGATCAGG4146122GAGTGTGGGTGTGTTGAGGAAGAGGGATCAGGGAGTGTGGGTGTGTTGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCTCAACACACCCACACTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTCAACACACCCACACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.333 | 0.324 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTCAACACACCCACACTC&k=0&no_gap=0&offset=0&limit=50
0.395 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTGTGGGTGTGTTGAGGA&k=0&no_gap=0&offset=0&limit=41
0.400 | 0.005 | cgi_end;

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