GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:02:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

000001602352_K03.ab1 Eucalyptus globulus under low temperature Eucalyptus globulus cDNA, mRNA sequence.
ES592659.1:564-588
TTGAGATCGCGAGAGGGAAGAAGAGAGCTG564GAGAGACGGAGCTGAACTGGGAGGACTACAGAAGATGGAATTCACCCCGTGTGTG
GR-SE-001-GO-033-F03 Seedlings (EUGR-SE) Eucalyptus grandis cDNA clone GR-SE-001-GO-033-F03 5', mRNA sequence.
HS049224.1:235-259
TTGAGATCGCGAGAGGGAAGAAGAGAGCTG235GAGAGACGGAGCTGAACTGGGAGGACTACAAGAAGATGGAATTCACCCAGTGTGT
GR-SE-001-GO-081-A11 Seedlings (EUGR-SE) Eucalyptus grandis cDNA clone GR-SE-001-GO-081-A11 5', mRNA sequence.
HS052668.1:164-188
TTGAGATCGCGAGAGGGAAGAAGAGAGCTG164GAGAGACGGAGCTGAACTGGGAGGACTACAAGAAGATGGAATTCACCCAGTGTGT
GR-TS-002-CN-009-D08 Treated seedlings (EUGR-TS) Eucalyptus grandis cDNA clone GR-TS-002-CN-009-D08 5', mRNA sequence.
HS063883.1:469-493
TTGAGATCGCGAGAGGGAAGAAGAGAGCTG469GAGAGACGGAGCTGAACTGGGAGGACTACAAGAAGATGGAATTCACCCAGTGTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTCCCAGTTCAGCTCCGTCTCTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTCCCAGTTCAGCTCCGTCTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.170 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTCCCAGTTCAGCTCCGTCTCTC&k=0&no_gap=0&offset=0&limit=50
0.781 | 0.611 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGACGGAGCTGAACTGGGAGGA&k=0&no_gap=0&offset=0&limit=50
0.784 | 0.003 | cgi_end;

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