GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:12:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 851 from patent US 6768041.
AR566879.1:1482-1507
TACCATAGAACATCCAGCCCTGCTTGTCTG1482TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
Sequence 948 from patent US 6768041.
AR566919.1:1692-1717
TACCATAGAACATCCAGCCCTGCTTGTCTG1692TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
Sequence 961 from patent US 6768041.
AR566925.1:3788-3813
TACCATAGAACATCCAGCCCTGCTTGTCTG3788TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
Sequence 962 from patent US 6768041.
AR566926.1:3780-3805
TACCATAGAACATCCAGCCCTGCTTGTCTG3780TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
JP 2002534115-A/437: Compositions isolated from plant cells and utilization of the same in modifying plant cell signal transduction.
BD267358.1:1482-1507
TACCATAGAACATCCAGCCCTGCTTGTCTG1482TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
Eucalyptus camaldulensis mRNA, clone: Stem_001_000228D07, 3'-EST.
FY829245.1:365-390
TACCATAGAACATCCAGCCCTGCTTGTCTG365TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA
GR-PU-000-MG-009-C04.R Young leaves infected by Puccinia psidii (EUGR-PU) Eucalyptus grandis cDNA clone GR-PU-000-MG-009-C04.R 5', mRNA sequence.
HS041294.1:219-244
TACCATAGAACATCCAGCCCTGCTTGTCTG219TATAGATCTTAAAGGAGGGGCGAGGAGTCCAAAAGGTGTATATTTTCATCGTCGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTCGCCCCTCCTTTAAGATCTATA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTCGCCCCTCCTTTAAGATCTATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTCGCCCCTCCTTTAAGATCTATA&k=0&no_gap=0&offset=0&limit=50
0.294 | 0.198 | search_minus_done; http://172.18.8.135:50400/match?q=TATAGATCTTAAAGGAGGGGCGAGGA&k=0&no_gap=0&offset=0&limit=50
0.299 | 0.005 | cgi_end;

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