GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-28 07:45:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sparus aurata genome assembly, chromosome: 15.
LR537135.1:14635946-14635965
GCCTGGCTGGTCTCTGACTTGCTCTCTGCA14635946TCCTGCAAGAGACTGTGGTGGAAAAATATGTCAGATTTTCTGCACTCTTT
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 15.
LR884474.1:13215406-13215425
GCCTGGCTGGTCTCTGACTTGCTCTCTGCA13215406TCCTGCAAGAGACTGTGGTGGAAAAAACATGTCAGATTTTCTGCACTCTT
Anas platyrhynchos genome assembly, chromosome: 8.
LS423618.1:14793224-14793243
GGAACAGACCTGCTCTGTGCTGGAAGGCTT14793224TCCTGCAAGAGACTGTGGTGTTAATTTAGAAGATGGCATTCTTCCCAAAC
Somateria mollissima genome assembly, chromosome: 8.
OX598310.1:15866444-15866463
GGGAACAGACCTGCTCTGTGTTGGAAGGCT15866444TCCTGCAAGAGACTGTGGTGTTAATTTAGAAGATGGCATTCTTCCCAAAC
Somateria mollissima genome assembly, chromosome: 8.
OX598697.1:15703080-15703099
GGGAACAGACCTGCTCTGTGTTGGAAGGCT15703080TCCTGCAAGAGACTGTGGTGTTAATTTAGAAGATGGCATTCTTCCCAAAC
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:55018257-55018276
GAAGGCGTTACCTTGTGCAAGTCTTCATAA55018257TCCTGCAAGAGACTGTGGTGCCTCAGCCGAGTCCTCTGATCCTGATAGAG
Vigna unguiculata cultivar Xiabao 2 chromosome Vu03.
CP039346.1:9767578-9767597
AAAGGCGTTACCTTGTGCAAGTCTTCATAA9767578TCCTGCAAGAGACTGTGGTGTCTGAGCCTAGACCTCTGATCCTGATAGAC
Zootoca vivipara genome assembly, chromosome: 2.
OY735903.1:73793796-73793815
TCATCTTTTAAATCCACCCAAGCTGGCGCC73793796CACCACAGTCTCTTGCAGGAGAAATGTCCATGCTGTGTGAAGACGTATAT
Anas acuta genome assembly, chromosome: 8.
OZ009970.1:16634995-16635014
GTTTGGGAAGAATGCCATCTTCTAAATTAA16634995CACCACAGTCTCTTGCAGGAAAGCCTTCCAGCACAGAGCAGGTCTGTTCC
Vigna angularis mRNA, clone: VES06I24.
HX944555.1:309-328
CTCTATCAGGATCAGAGGACTCGGCTGAGG309CACCACAGTCTCTTGCAGGATTATGAAGACTTGCACAAGGAAACAGAAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTGCAAGAGACTGTGGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTGCAAGAGACTGTGGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.112 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTGCAAGAGACTGTGGTG&k=0&no_gap=0&offset=0&limit=50
0.246 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=CACCACAGTCTCTTGCAGGA&k=0&no_gap=0&offset=0&limit=43
0.248 | 0.002 | cgi_end;

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