GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:08:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Furcifer pardalis isolate Fpa_1 chromosome 3.
CP126892.1:138606102-138606121
AGCCAAGTTTGCAGATCCCTGGCCTAGACT138606102TCCTTCTCACCAATGGCTTCTTCTTTCTCCCCAGATAATTACCCTAGCTG
Phalacrocorax carbo genome assembly, chromosome: 2.
OY997602.1:79123073-79123092
ATTTGGACTTAGTGCTCTGACTGTGAAGTC79123073TCCTTCTCACCAATGGCTTCAACTTCTCTATATTGTCAAAAATTGGAAAG
Sequence 136746 from Patent WO2008034648.
FB917473.1:125-144
ATCATCAACAACAACACTTTTCCATCACAA125TCCTTCTCACCAATGGCTTCCAAGACCATCCATCAATCAACTCATACATC
Sequence 136746 from Patent EP2090662.
HB787532.1:125-144
ATCATCAACAACAACACTTTTCCATCACAA125TCCTTCTCACCAATGGCTTCCAAGACCATCCATCAATCAACTCATACATC
Trifolium pratense RNA for putative glucosyltransferase, complete cds, clone: C738.
AB236857.1:131-150
ATCATCAACAACAACACTTTTCCATCACAA131TCCTTCTCACCAATGGCTTCCAAGACCATCCATCAATCAACTCATACATC
Trifolium subterraneum genome assembly, chromosome: 6.
OX637466.1:55327676-55327695
CCAAACTACTTCATCTTCATTCCGTTACTA55327676TCCTTCTCACCAATGGCTTCCTTGACCATCCATCCATCAACACTTACATC
Trifolium dubium genome assembly, chromosome: 15.
OX638076.1:30796857-30796876
TTCATCAAAATTTCTCCATCACTATCACTA30796857TCCTTCTCACCAATGGCTTCTTCGACCATCCATCTATCGACACTTATATC
Gammarus pisinnus mitochondrion, complete genome.
MK354236.1:999-1018
TAGAGCTTTACTTCTTAAGTGCGGTGCCGC999TCCTTCTCACCAATGGCTTCCTGCTGTCGTAGAAGGAGTCAGATGAAGTC
Phalacrocorax aristotelis genome assembly, chromosome: 2.
OX451223.1:89471908-89471927
CTTTCCAATTTTTGACAATGTAGAGAAGTT89471908GAAGCCATTGGTGAGAAGGAGACTTCACAGTCAGAGCACTAAGTCCAAAT
Trifolium dubium genome assembly, chromosome: 3.
OX638064.1:721151-721170
GATGTAAGTGTCGATTGATGGATGGTCGAA721151GAAGCCATTGGTGAGAAGGATAGTAATTTGTTGAGGATGATGAATGAGAA
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:1128350-1128369
GATGTAAGAATGAATGGATGAATGGTCAAA1128350GAAGCCATTGGTGAGAAGGATAGTGATGGAATGAAGAGGATTGTGAATGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCCTTCTCACCAATGGCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTTCTCACCAATGGCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.162 | 0.154 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTTCTCACCAATGGCTTC&k=0&no_gap=0&offset=0&limit=50
0.190 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCCATTGGTGAGAAGGA&k=0&no_gap=0&offset=0&limit=42
0.192 | 0.002 | cgi_end;

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