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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:58:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Peromyscus eremicus genome assembly, chromosome: 1.
OX460394.1:59113465-59113484
GACTAGCTTGTGGACTGTTATTACTGTTAG59113465TCCTTGAAGTGGCTAAGGGAGATATCTGATTCCAGAGGAAGCCTTTCCTG
Onychomys leucogaster genome assembly, chromosome: 3.
OX460420.1:68726447-68726466
GACTTGCACGTGCACTGTTGTTAATGTCAG68726447TCCTTGAAGTGGCTAAGGGAGATATCTGATTCCAGAGGAAACCTTTCCTG
Peromyscus eremicus genome assembly, chromosome: 1.
OX460466.1:58780894-58780913
GACTAGCTTGTGGACTGTTATTACTGTTAG58780894TCCTTGAAGTGGCTAAGGGAGATATCTGATTCCAGAGAAAGCCTTTCCTG
KS19011B02 KS19 Capsicum annuum cDNA, mRNA sequence.
GD088358.1:506-525
GAGTCTAATGAAGAAGAATGGGTTAAAGTT506TCCTTGAAGTGGCTAAGGGATTTGAAAGTCTCGTTTTCTCTCTCATTCAT
KS19028E01 KS19 Capsicum annuum cDNA, mRNA sequence.
GD089903.1:506-525
GAGTCTAATGAAGAAGAATGGGTTAAAGTT506TCCTTGAAGTGGCTAAGGGATTTGAAAGTCTCGTTTTCTCTCTCATTCAT
TSA: Capsicum annuum MGMT_Contig7631, mRNA sequence.
JW057875.1:2774-2793
GAGTCTAATGAAGAAGAATGGGTTAAAGTT2774TCCTTGAAGTGGCTAAGGGATTTGAAAGTCTCGTTTTCTCTCTCATTCAT
Tinea pellionella genome assembly, chromosome: 25.
OX411269.1:3139806-3139825
AAGGAGGAAAGACGTGACTGGGAAGATCGT3139806TCCTTGAAGTGGCTAAGGGATAATGAGAGCTACCATAGGTGACAGTGCCT
Onychomys torridus genome assembly, chromosome: 8.
LR877195.1:102891234-102891253
CAGGAAAGGCTTTCTCTGGAATCAGATATC102891234TCCCTTAGCCACTTCAAGGACTACAGGAAACAACCCAGGTGGGTGCCCAA
Onychomys arenicola genome assembly, chromosome: 8.
OX460354.1:101209649-101209668
CAGGAAAGGCTTTCTCTGGAATCAGATATC101209649TCCCTTAGCCACTTCAAGGACTACAGGAAGTACCACCCAGGTGGGTGCCC
Onychomys leucogaster genome assembly, chromosome: 8.
OX460378.1:99605651-99605670
CAGGAAAGGCTTTCTCTGGAATCAGATATC99605651TCCCTTAGCCACTTCAAGGACTACAGGAAGTACCACCCAGGTGGGTGCCC
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:100449223-100449242
CAGGAAAGGCTTTCTCTGGAATCAGATATC100449223TCCCTTAGCCACTTCAAGGACTACAGGAAGTACCACCCAGGTGGGTGCCC
Onychomys arenicola genome assembly, chromosome: 8.
OX460449.1:95237606-95237625
CAGGAAAGGCTTTCTCTGGAATCAGATATC95237606TCCCTTAGCCACTTCAAGGACTACAGGAAGTACCACCCAGGTGGGTGCCC
Onychomys torridus genome assembly, chromosome: 8.
OX460889.1:102891234-102891253
CAGGAAAGGCTTTCTCTGGAATCAGATATC102891234TCCCTTAGCCACTTCAAGGACTACAGGAAACAACCCAGGTGGGTGCCCAA
KS15058D01 KS15 Capsicum annuum cDNA, mRNA sequence.
GD068844.1:287-306
ATGAATGAGAGAGAAAACGAGACTTTCAAA287TCCCTTAGCCACTTCAAGGAAACTTTAACCCATTCTTCTTCATTAGACTC
TSA: Capsicum annuum MGMT_Contig25076, mRNA sequence.
JW075320.1:3957-3976
TCCGCTAATTCAAACCCTAAAAATTTCAAA3957TCCCTTAGCCACTTCAAGGAAACTTTAACCCATTCTTCTTCATTAGACTC
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:693880-693899
ATGAATGAGAGAGAAAACGAGACTTTCAAA693880TCCCTTAGCCACTTCAAGGAAACTTTAACCCATTCTTCTTCATTAGACTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:820843-820862
ATGAATGAGAGAGAAAACGAGACTTTCAAA820843TCCCTTAGCCACTTCAAGGAAACTTTAACCCATTCTTCTTCATTAGACTC
Ditula angustiorana genome assembly, chromosome: 7.
OY829479.1:15302326-15302345
CTCCGGCGAGCTCCATTTGATGGTCAGGAG15302326TCCCTTAGCCACTTCAAGGAGGGCCACCGAGAGTTTTTAGGGGCTAAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCTTGAAGTGGCTAAGGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTTGAAGTGGCTAAGGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.365 | 0.356 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTTGAAGTGGCTAAGGGA&k=0&no_gap=0&offset=0&limit=50
0.585 | 0.221 | search_minus_done; http://172.18.8.135:50400/match?q=TCCCTTAGCCACTTCAAGGA&k=0&no_gap=0&offset=0&limit=43
0.593 | 0.007 | cgi_end;

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