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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:34:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

SV6_20D07_CZ10re_068 SV6 Solanum chacoense cDNA, mRNA sequence.
DN979875.1:293-318
CTTCCCAAGTGTTTCTTGATGCCAGCCATC293TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACACATCTTCTAAATT
S_T3_226_G03_20APRIL2006_019.1 LIPTS Solanum tuberosum cDNA clone S_T3_226_G03_20APRIL2006_019, mRNA sequence.
JG700002.1:307-332
CTTCCCAAGTGTTTCTTGATGCCAGCCATC307TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACGCATCTTCTAAATT
POTL955TF Solanum tuberosum RHPOTKEY BAC ends Solanum tuberosum genomic clone RHPOTKEY102_I14, genomic survey sequence.
ER791218.1:544-569
CTTCCCAAGTGTTTCTTGATGCCAGCCATC544TCCTTGATCCCCTCCCTTTGGTGTGAAGCATGTTGTTGTTACGTATCTTCTAAATT
Solanum tuberosum cultivar P8 chromosome 7.
CP046689.1:51262898-51262923
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51262898TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTSTTGTTGTTACGYATCTTCTAAATT
Solanum tuberosum cultivar P8 chromosome 7.
CP046689.1:51280248-51280273
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51280248TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTCTTGTTGTTACGCATCTTCTAAATT
Solanum tuberosum cultivar MSH/14-112 chromosome 7.
CP046700.1:51263750-51263775
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51263750TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACGYATCTTCTAAATT
Solanum tuberosum cultivar MSH/14-112 chromosome 7.
CP046700.1:51281100-51281125
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51281100TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTCTTGTTGTTACGCATCTTCTAAATT
Solanum pinnatisectum cultivar CGN17745 chromosome 7.
CP047562.1:51249894-51249919
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51249894TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACGCATCTTCTAAATT
Solanum pinnatisectum cultivar CGN17745 chromosome 7.
CP047562.1:51267244-51267269
CTTCCCAAGTGTTTCTTGATGCCAGCCATC51267244TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTCTTGTTGTTACGCATCTTCTAAATT
Solanum tuberosum cultivar Solyntus chromosome 7.
CP055240.1:35016752-35016777
CTTCCCAAGTGTTTCTTGATGCCAGCTATC35016752TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACGCATCTTCTAAATT
Solanum tuberosum cultivar Solyntus chromosome 7.
CP055240.1:35178656-35178681
CTTCCCAAGTGTTTCTTGATGCCAGCCATC35178656TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTGTTGTTGTTACACATCTTCTAAATT
Solanum verrucosum cultivar 11H23 chromosome 7.
CP133618.1:45306366-45306391
CTTCCCAAGTGTTTCTTGATGCCAGCCATC45306366TCCTTGATCCCCTCCCTTTGGTGTGAAGCCTCTTGTTGTTACGCATCTTCTAAATT
Solanum tuberosum chromosome 7 clone RHPOTKEY162E09, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.
AC240330.1:33435-33460
AATTTAGAAGATACGTAACAACAACAGGCT33435TCACACCAAAGGGAGGGGATCAAGGAGATGGCTGGCATCAAGAAACACTTGGGAAG
Solanum tuberosum chromosome 7 clone RHPOTKEY162E09, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.
AC240330.1:53678-53703
AATTTAGAAGATACGTAACAACAACATGCT53678TCACACCAAAGGGAGGGGATCAAGGAGATGGCTGGCATCAAGAAACACTTGGGAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCTTGATCCCCTCCCTTTGGTGTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTTGATCCCCTCCCTTTGGTGTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.342 | 0.333 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTTGATCCCCTCCCTTTGGTGTGA&k=0&no_gap=0&offset=0&limit=50
0.402 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=TCACACCAAAGGGAGGGGATCAAGGA&k=0&no_gap=0&offset=0&limit=38
0.404 | 0.001 | cgi_end;

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