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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:37:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pygmaeus genome assembly, chromosome: X.
OX465306.1:97864601-97864620
TCATCATTACTCTCTCCCCACTACATTCTA97864601TCCTTTTGCCAGCTTCATTTTTCTAACACGTATCACTACTGGCATCTTAT
Fringilla coelebs genome assembly, chromosome: 7.
OY740731.1:19082164-19082183
TTAGGACCTCTCCAAATTCTAATTATCAGT19082164TCCTTTTGCCAGCTTCATTTTCCTCATAAGCTGTAAGTTGGAAGTAAACT
TSA: Allium cepa CUDHLF2_5777 mRNA sequence.
JR848595.1:600-619
AAAGAGGAGGAAAGGTGTGCCTCGTAGAGC600TCCTTTTGCCAGCTTCATTTTGGAATTCTAGTTGAGTTCAAAGATACAAT
Nonlabens marinus S1-08 DNA, nearly complete genome.
AP014548.1:645310-645329
ATTAGGATTAGGAGTTTATGCTATCACCGT645310TCCTTTTGCCAGCTTCATTTTTAGCTTGTATGGCGCACAAGGTGAAGTAC
5_Tge_b3v08.
OE844964.1:13904-13923
GACTCTTAACCTTACGGGTTTTCACTGAGC13904TCCTTTTGCCAGCTTCATTTCTTCAACACTGGGCTTCGCTAGTGTCATTG
Acomys kempi genome assembly, chromosome: 7.
OU015361.1:21208438-21208457
CCAGAAAAACCAAACAAACCAAAATTATTA21208438AAATGAAGCTGGCAAAAGGAAGATTTGGCAGATTCACAAGTTGGCAAGGA
Acomys dimidiatus genome assembly, chromosome: 7.
OU015380.1:21696506-21696525
CCAGAAAAACCAAACAAATCAAAATTATTA21696506AAATGAAGCTGGCAAAAGGAAGATCTGGCAGATTCACAAGTTGGCAAGGA
Acomys percivali genome assembly, chromosome: 7.
OU015748.1:21713615-21713634
CCAGAAAAACCAAACAAACCAAAATTATTA21713615AAATGAAGCTGGCAAAAGGACGATTTGGCAGATTCACAAGTTGGCAAGGA
Erithacus rubecula genome assembly, chromosome: 8.
LR812110.1:18735631-18735650
AATTTACTTTCAACTTACAGCTTAGGTGGA18735631AAATGAAGCTGGCAAAAGGAACTGATAATTAGAAGGGTCCTGATATTGAT
Cinclus cinclus genome assembly, chromosome: 9.
OY759686.1:10227247-10227266
AATTTACTTTCAACTTACAGGATATGTGGA10227247AAATGAAGCTGGCAAAAGGAACTGATAATTAGAATCTGGAATGGTCCCAA
Parapoynx stratiotata genome assembly, chromosome: 8.
OU342465.1:3386927-3386946
TAAATTATAAAGTTTTATAGGTCTGCCAGT3386927AAATGAAGCTGGCAAAAGGAGGCGAAGACGTTTTGCATAATTGGTAATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCCTTTTGCCAGCTTCATTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCCTTTTGCCAGCTTCATTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.361 | 0.352 | search_plus_done; http://172.18.8.135:50400/match?q=TCCTTTTGCCAGCTTCATTT&k=0&no_gap=0&offset=0&limit=50
0.481 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=AAATGAAGCTGGCAAAAGGA&k=0&no_gap=0&offset=0&limit=45
0.485 | 0.004 | cgi_end;

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