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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-07 05:58:01, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158659.1:51096196-51096215
ATCAACTTCTCTTCGAAACCCAATTAAGCT51096196TCGAGTCTCTTCTTGAACCCAAGTCTCCGCTCTCTTCTTTGGGGCTTTAA
Agrocybe praecox genome assembly, chromosome: 8.
OZ024847.1:305803-305822
AAGACGGCGCTGTGCACGGCCTTCAATCCC305803TCGAGTCTCTTCTTGAACCCGTCGGACAAGCGGTTGTATGCCTCGACTTG
Lissotriton helveticus genome assembly, chromosome: 9.
OZ180055.1:935731899-935731918
TTGAACTCATTTTGTTCTTTATTGAGCTCA935731899TCGAGTCTCTTCTTGAACCCCGTAATGGTGGTTTTGAAATGGGCTTCTGT
TSA: Cannabis sativa PK20543.1_1.CasaPuKu mRNA sequence.
JP450170.1:433-452
TTAAAGCCCCAAAGAAGAGAGCGGAGACTT433GGGTTCAAGAAGAGACTCGAAGCTTAATTGGGTTTCGAAGAGAAGTTGAT
TSA: Cannabis sativa PK20543.2_1.CasaPuKu mRNA sequence.
JP456216.1:288-307
TTAAAGCCCCAAAGAAGAGAGCGGAGACTT288GGGTTCAAGAAGAGACTCGAAGCTTAATTGGGTTTCGAAGAGAAGTTGAT
Cinnamomum chago isolate CC202301 chromosome 3.
CP142453.1:83967700-83967719
GCAGAGATCTCGAATAAGGTGGTACTGGAC83967700GGGTTCAAGAAGAGACTCGACAGAGCTAAAGGCAGATGTGTAGAGGAATT
Persea americana cultivar West Indian chromosome Pa07.
CP152284.1:58353272-58353291
GCTGAAATCTCGAACAAAGTGATCCTCGAC58353272GGGTTCAAGAAGAGACTCGACCGAGCTAAAGAAAGATGGGCGGAAGAGCT
Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158649.1:4656018-4656037
TTAAAGCCCCAAAGAAGAGAGCGGAGACTT4656018GGGTTCAAGAAGAGACTCGAAGCTTAATTGGGTTTCGAAGAGAAGTTGAT
Sisyra terminalis genome assembly, chromosome: 4.
OY292277.1:19319093-19319112
GCCTCCAACAGGACAAATCTCCTGGGGGAT19319093GGGTTCAAGAAGAGACTCGAGTAGAACCAGAAACGTGACGTATGTGAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGAGTCTCTTCTTGAACCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGAGTCTCTTCTTGAACCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.415 | 0.406 | search_plus_done; http://172.18.8.135:50900/match?q=TCGAGTCTCTTCTTGAACCC&k=0&no_gap=0&offset=0&limit=50
0.746 | 0.331 | search_minus_done; http://172.18.8.135:50900/match?q=GGGTTCAAGAAGAGACTCGA&k=0&no_gap=0&offset=0&limit=47
0.750 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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