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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-06 23:22:20, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 6, clone: LjT14A08, TM0085.
AP009950.1:25960-25979
TAGTGTTGGTTAGTAGAAATAATGATTAAG25960TCGCTAGCCTCACTATGATGTGGATGTTTGTCTTGAACAAGATTACTTCC
Lotus japonicus ASTRAY gene for bZIP with a Ring-finger motif, complete cds, ecotype:Gifu.
AB092678.1:3107-3126
TAGTGTTGGTTAGTAGAAATAATGATTAAG3107TCGCTAGCCTCACTATGATGTGGATGTTTGTCTTGAACAAGATTACTTCC
Lotus japonicus ASTRAY gene for bZIP with a Ring-finger motif, complete cds, ecotype:Miyakojima.
AB092679.1:3107-3126
TAGTGTTGGTTAGTAGAAATAATGATTAAG3107TCGCTAGCCTCACTATGATGTGGATGTTTGTCTTGAACAAGATTACTTCC
Lotus japonicus genomic DNA, clone: LjB12O06, BM2011.
AP009646.1:21267-21286
TAGTGTTGGTTAGTAGAAATAATGATTAAG21267TCGCTAGCCTCACTATGATGTGGATGTTTGTCTTGAACAAGATTACTTCC
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:47603108-47603127
TAGTGTTGGTTAGTAGAAATAATGATTAAG47603108TCGCTAGCCTCACTATGATGTGGATGTTTGTCTTGAACAAGATTACTTCC
Melampyrum sylvaticum genome assembly, chromosome: 4.
OZ219242.1:485720409-485720428
ATTGTCATGGGTGACTTTAACACCATTTTA485720409CATCATAGTGAGGCTAGCGATGGGTTCATCAATTATGACAACTTGCAAGA
Lotus pedunculatus genome assembly, chromosome: 5.
OZ243172.1:37320867-37320886
GGAAGTAATCTTGTTCAAGACAAACATTCA37320867CATCATAGTGAGGCTAGCGACTTTATCATTATTTCTTCTAACCAACACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGCTAGCCTCACTATGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGCTAGCCTCACTATGATG | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.201 | 1.192 | search_plus_done; http://172.18.8.135:50900/match?q=TCGCTAGCCTCACTATGATG&k=0&no_gap=0&offset=0&limit=50
1.570 | 0.369 | search_minus_done; http://172.18.8.135:50900/match?q=CATCATAGTGAGGCTAGCGA&k=0&no_gap=0&offset=0&limit=45
1.571 | 0.001 | cgi_end;

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