GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 19:30:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KR 1020120052533-A/4: METHOD FOR DEVELOPING GENE SPECIFIC MOLECULAR MARKERS USING PROMOTER REGION SEQUENCE POLYMORPHISM IDENTIFIED AMONG FLOWERING TIME RELATED GENES.
DI206223.1:1381-1403
CCCTCCTCCGCTTCCCACCGCCTCCTTCTC1381TCGCTGCACCACCGGCTCCTCCGACAAACCTAAGCATATTAATTATATATAGT
Medicago truncatula clone mth2-9f16, complete sequence.
AC139708.15:35606-35628
CCCTCCTCCGCTTCCCACCGCCTCCTTCTC35606TCGCTGCACCACCGGCTCCTCCGACAAACCTAAGCATATTAATTATATATAGT
Medicago lupulina genome assembly, chromosome: 6.
OY283144.1:9088548-9088570
CCCTCCTCCGCTTCCCACCGCCTCCTTCTC9088548TCGCTGCACCACCGGCTCCTCCGACAAACCTAAACATAAAGTATATATAGTTG
Corynebacterium lujinxingii strain zg-917 chromosome, complete genome.
CP061032.1:2244168-2244190
GACAGGTTCGTCGCCAAGCGCTGCGAGCAG2244168TCGCTGCACCACCGGCTCCTCCGGCATGGACACGGAGGCGAAGTAATCCCACA
Sequence 7313 from patent US 8030546.
GY459538.1:465-487
CTCTCGATGCTCTCTCTCAAGAAGGTTTGT465CGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGG
Sequence 7313 from patent US 10597667.
MO970691.1:465-487
CTCTCGATGCTCTCTCTCAAGAAGGTTTGT465CGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGG
Medicago truncatula Unifoliata protein (Uni) mRNA, complete cds.
AY928184.1:465-487
CTCTCGATGCTCTCTCTCAAGAAGGTTTGT465CGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGG
Medicago truncatula UNIFOLIATA protein (Uni) gene, complete cds.
DQ672589.1:776-798
ACTATATATAATTAATATGCTTAGGTTTGT776CGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGG
Medicago arabica genome assembly, chromosome: 4.
OX326967.1:54092736-54092758
TAACTTGTGACAACCTTAAACTAGGTTTGT54092736CGGAGGAGCCGGTGGTGCAGCGAGAGAAGGAGGCGGTGGGAAGCGGAGGAGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCGCTGCACCACCGGCTCCTCCG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGCTGCACCACCGGCTCCTCCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.132 | search_plus_done; http://172.18.8.135:50400/match?q=TCGCTGCACCACCGGCTCCTCCG&k=0&no_gap=0&offset=0&limit=50
0.249 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CGGAGGAGCCGGTGGTGCAGCGA&k=0&no_gap=0&offset=0&limit=46
0.253 | 0.003 | cgi_end;

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