GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 22:03:51, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Musa acuminata subsp. malaccensis isolate AA chromosome 1.
CP126370.1:18142180-18142199
TCCGGAGGCTCGTTGGTTGCAGCTCTCATT18142180TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa acuminata subsp. malaccensis isolate AA chromosome 12.
CP126381.1:18340780-18340799
TCCGGAGGCTCGTTGGTTGCAGCTCTCATT18340780TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A01.
HG996466.1:10303137-10303156
TCTGGAGGCTCGTTGGTTGCAGCTCTCATT10303137TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCGTGCCCTTTCTT
Musa schizocarpa genome assembly, chromosome: S01.
LS990915.1:11142884-11142903
TCTGGAGGCTCGTTGGTTGCAGCTCTCATT11142884TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa banksii genome assembly, chromosome: 1.
OZ184652.1:10436079-10436098
TCTGGAGGCTCGTTGGTTGCAGCTCTCGTT10436079TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa acuminata var. zebrina genome assembly, chromosome: 1.
OZ184675.1:10822075-10822094
TCTGGAGGCTCGTTGGTTGCAGCTCTCGTT10822075TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa hybrid cultivar genome assembly, chromosome: 1.
OZ185480.1:10800783-10800802
TCTGGAGGCTCGTTGGTTGCAGCTCTCATT10800783TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa hybrid cultivar genome assembly, chromosome: 1.
OZ185492.1:35120734-35120753
TCTGGAGGCTCGTTGGTTGCAGCTCTCATT35120734TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 1.
OZ193586.1:13553197-13553216
TCTGGAGGCTCGTTGGTTGCAGCTCTCATT13553197TCGCTGGAGCACTAGTCAAAATAATTGGGTTAACAATCTTGCCCTTTCTT
Clepsis consimilana genome assembly, chromosome: 29.
OZ262583.1:1688780-1688799
GGGGACTGATGGGGACTCACCAGCGCCTGG1688780TCGCTGGAGCACTAGTCAAACCACTGGTGGCGGGGACTGATGGGGACTCA
TSA: Musa acuminata AAA Group Unigene16004_NK1 mRNA sequence.
JV439338.1:1498-1517
AAGAAAGGGCAAGATTGTTAACCCAATTAT1498TTTGACTAGTGCTCCAGCGAAACGAGAGCTGCAACCAACGAGCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGCTGGAGCACTAGTCAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGCTGGAGCACTAGTCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.665 | 0.656 | search_plus_done; http://172.18.8.135:50900/match?q=TCGCTGGAGCACTAGTCAAA&k=0&no_gap=0&offset=0&limit=50
1.595 | 0.930 | search_minus_done; http://172.18.8.135:50900/match?q=TTTGACTAGTGCTCCAGCGA&k=0&no_gap=0&offset=0&limit=40
1.596 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).