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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:57:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-EO02039_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02039 5', mRNA sequence.
EY410611.1:206-229
TGGATTTCTCAGAGTGCCTTGAGGATCTCA206TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGTTTGCAACCTTGACC
pOP-EO05443_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05443 5', mRNA sequence.
EY412037.1:184-207
TGGATTTCTCACAGTGCCTTGAGGATCTCA184TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGGTTGCAACCTTGACC
pOP-EO05482_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05482 5', mRNA sequence.
EY413651.1:191-214
TGGATTTCTCAGAGTGCCTTGAGGATCTCA191TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGTTTGCAACCTTGACC
Contig19 DEGdwarf cDNA library from oil palm spear leaves Elaeis guineensis cDNA clone Contig19, mRNA sequence.
JZ905531.1:125-148
TGGATTTCTCAGAGTGCCTTGAGGATCTCA125TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGTTTGCAACCTTGACC
Elaeis guineensis EST, clone (6lib)_isotig33234.
LM628433.1:346-369
TGGATTTCTCAGAGTGCCTTGAGGATCTCA346TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGTTTGCAACCTTGACC
TSA: Elaeis guineensis isotig09903.Elguifruit mRNA sequence.
JO097130.1:215-238
TGGATTTCTCAGAGTGCCTTGAGGATCTCA215TCGGCTCCTGATATGGTGAATGCTCCACCCTCCTCGATGTTTGCAACCTTGACC
OPYF02846 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF1315.seq, mRNA sequence.
EL683517.1:416-439
GTCAAGGTTGCAAACATTCGAGGAGGGTGG416AGCATTCACCATATCAGGAGCCGATGAAATCCTCAAGGCACTCTGAGAAATNCA
OPMF01276 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 133-D03-T3.seq, mRNA sequence.
EL685036.1:450-473
GGTCAAGGTTGCAAACATCGAGGAGGGTGG450AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
OPSC00826 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 193-G11-T3.seq, mRNA sequence.
EL689057.1:478-501
GGTCAAGGTTGCAAACATCGAGGAGGGTGG478AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
OPR01248 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE217-G12-T3.seq, mRNA sequence.
EL691214.1:399-422
GGTCAAGGTTGCAAACATCGAGGAGGGTGG399AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
OPR01610 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE221-F9-T3.seq, mRNA sequence.
EL691575.1:464-487
GGTCAAGGTTGCAAACATCGAGGAGGGTGG464AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
OPR03585 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2946.seq, mRNA sequence.
EL693530.1:382-405
GGTCAAGGTTGCAAACATCGAGGACGGTGG382AGCATTCACCATATCAGGAGCCGACTGAGATCCTCAAGGCACTCTGAGAAATCC
OPR04343 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A4010.seq, mRNA sequence.
EL694280.1:458-481
GGTCAAGGTTGCAAACATCGAGGAGGGTGG458AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
EoEST2447 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-2615 5' similar to thioredoxin-dependent peroxidase, mRNA sequence.
ES370637.1:460-483
GGTCAAGGTTGCAAACATCGAGGAGGGTGG460AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAG
pOP-CEO02213_EST_C_1_pSK_SK CEO (Oil Palm Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CEO02213 5', mRNA sequence.
EY397551.1:286-309
GGTCAAGGTTGCAAACATCGAGGAGGGTGG286AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
pOP-CNI01347_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI01347 5', mRNA sequence.
EY403718.1:233-256
GGTCAAGGTTGCAAACATCGAGGAGGGTGG233AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
pOP-EAP01072_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP01072 5', mRNA sequence.
EY407801.1:90-113
GGTCAAGGTTGCAAACATCGAGGAGGGTGG90AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
pOP-EO07288_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO07288 5', mRNA sequence.
EY408619.1:457-480
GGTCAAGGTTGCAAACATCGAGGAGGGTGG457AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
pOP-EO06265_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO06265 5', mRNA sequence.
EY412017.1:457-480
GGTCAAGGTTGCAAACATCGAGGAGGGTGG457AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA
pOP-EO08264_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO08264 5', mRNA sequence.
EY413151.1:461-484
GGTCAAGGTTGCAAACATCGAGGAGGGTGG461AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTC
TSA: Elaeis guineensis EgEfMPOB00135 peroxiredoxin mRNA, complete cds, mRNA sequence.
EU284949.1:444-467
GGTCAAGGTTGCAAACATCGAGGAGGGTGG444AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGA
Elaeis guineensis putative thioredoxin-dependent peroxidase (TPX) mRNA, complete cds.
KC146058.1:476-499
GGTCAAGGTTGCAAACATCGAGGAGGGTGG476AGCATTCACCATATCAGGAGCCGATGAGATCCTCAAGGCACTCTGAGAAATCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCGGCTCCTGATATGGTGAATGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGGCTCCTGATATGGTGAATGCT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.827 | 0.818 | search_plus_done; http://172.18.8.135:50400/match?q=TCGGCTCCTGATATGGTGAATGCT&k=0&no_gap=0&offset=0&limit=50
1.782 | 0.956 | search_minus_done; http://172.18.8.135:50400/match?q=AGCATTCACCATATCAGGAGCCGA&k=0&no_gap=0&offset=0&limit=44
1.793 | 0.010 | cgi_end;

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