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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-09 16:30:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

TSA: Musa acuminata AAA Group Unigene91062_NK1 mRNA sequence.
JV423742.1:515-534
TCATCTTGGGAGTAGCCTTGGTATCAATGA515TCGTCGGCATTATTCTAGGGAAGCG
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:15936505-15936524
AAAATTTTACAAACAATGCTAATATCGCTT15936505CCCTAGAATAATGCCGACGATCATTGATACCAAGGCTACTCCCAAGATGA
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:15883218-15883237
AAAATTTTACAAACAATGCTAATATCGCTT15883218CCCTAGAATAATGCCGACGATCATTGATACCAAGGCTACTCCCAAGATGA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:15957846-15957865
AAAATTTTACAAACAATGCTAATATCGCTT15957846CCCTAGAATAATGCCGACGATCATTGATACCAAGGCTACTCCCAAGATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGTCGGCATTATTCTAGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGTCGGCATTATTCTAGGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.196 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=TCGTCGGCATTATTCTAGGG&k=0&no_gap=0&offset=0&limit=50
0.303 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=CCCTAGAATAATGCCGACGA&k=0&no_gap=0&offset=0&limit=49
0.305 | 0.002 | cgi_end;

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