GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 13:50:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS01002F07 KS01 Capsicum annuum cDNA, mRNA sequence.
BM059622.1:4-27
AAA4TCGTCTTTCACTTGTCTTTTGTTCTTCTTCTTCATCATCATCATCATCATCATC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:252735150-252735173
ACAATTATCCCTAAAGTATCCCCACAAAAA252735150TCGTCTTTCACTTGTCTTTTGTTCTTCTTCTTCATCATCATCATCATCAGCTTC
TSA: Capsicum annuum MGMT_Contig1178, mRNA sequence.
JW051422.1:1510-1533
GAAGCTGATGATGATGATGATGAAGAAGAA1510GAACAAAAGACAAGTGAAAGACGATTTTTGTGGGGATACTTTAGGGATAATTGT
Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:39375697-39375720
GATGATGATGATGATGATGATGAAGAAGAA39375697GAACAAAAGACAAGTGAAAGACGATTTTTGTGGGGATACTTTAGGGATAATTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCGTCTTTCACTTGTCTTTTGTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGTCTTTCACTTGTCTTTTGTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.124 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=TCGTCTTTCACTTGTCTTTTGTTC&k=0&no_gap=0&offset=0&limit=50
0.167 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=GAACAAAAGACAAGTGAAAGACGA&k=0&no_gap=0&offset=0&limit=48
0.168 | 0.002 | cgi_end;

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