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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-24 21:55:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna unguiculata cultivar Xiabao 2 chromosome Vu08.
CP039351.1:42481724-42481743
GTGATTTCAAGAGCGGATGGAGGAGGCGAA42481724TCGTGTTCGACAAGCTCAACAGAGGGAAGAGGCTTAAAGGAAGAAGAAGA
Vanrija pseudolonga isolate DUCC4014 chromosome 7.
CP086720.1:1130691-1130710
CGGTCAACGCCGACGGCTTCGTGTACGGGC1130691TCGTGTTCGACAAGCTCAACGTCACGCTGCAGGACGCCATCGAGGACGGC
MOPCF88TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF545746.1:368-387
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT368GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
MOPEL14TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF555478.1:368-387
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT368GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
UCRVU05_CCNN5171_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN5171.b1, mRNA sequence.
FG842447.1:336-355
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT336GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
UCRVU05_CCNN5600_b1 Cowpea IT84S-2049 Mixed Tissue and Conditions cDNA Library UCRVU05-2-2 Vigna unguiculata cDNA clone CCNN5600.b1, mRNA sequence.
FG843160.1:217-236
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT217GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
Vigna angularis mRNA, clone: VEPS04N17.
HX940249.1:356-375
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT356GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
Vigna angularis mRNA, clone: VES09B11.
HX945513.1:474-493
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT474GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M049C23, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces.
AC274171.1:33651-33670
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT33651GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:7548822-7548841
TCTTCTTCTTCCTTTAAGCCTCTTCCCTCT7548822GTTGAGCTTGTCGAACACGATTCGCCTCCTCCATCCGCTCTTGAAATCAC
Streptomyces sp. NBC_01794 chromosome, complete genome.
CP109081.1:152213-152232
GCCGAGTGGATCGGTGACCTTGCGGGTCTG152213GTTGAGCTTGTCGAACACGATGGTGGTCGCGGCGCCTGCGGGGTCGGTGA
Streptomyces sp. NBC_01750 chromosome, complete genome.
CP109137.1:118913-118932
GCCGAGTGGATCGGCGACCTTGCGGGTCTG118913GTTGAGCTTGTCGAACACGATGGTGGTCGCGGCGCCTGCGGGGTCGGTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCGTGTTCGACAAGCTCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCGTGTTCGACAAGCTCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.380 | 0.371 | search_plus_done; http://172.18.8.135:50400/match?q=TCGTGTTCGACAAGCTCAAC&k=0&no_gap=0&offset=0&limit=50
1.018 | 0.638 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGAGCTTGTCGAACACGA&k=0&no_gap=0&offset=0&limit=48
1.025 | 0.007 | cgi_end;

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