GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:52:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vespertilio murinus genome assembly, chromosome: 14.
OZ004718.1:35827746-35827765
TGCTCTGTGCCTTACACCACAGATATTTTG35827746TCTAGAGCCAAAAGACAAGGGGCTATCTGGCCACAGGGAGGAGATCTCAG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:29242584-29242603
TGAGGAAGGAACACGTATCGGCTTTTGGGT29242584TCTAGAGCCAAAAGACAAGGCTGCTAGTTCTGCGAAGTTCAATATTAAAT
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:29193118-29193137
TGAGGAAGGAACACGTATCGGCTTTTGGGT29193118TCTAGAGCCAAAAGACAAGGCTGCTAGTTCTGCGAAGTTCAATATTAAAT
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141916.1:9862610-9862629
AACGATCAATGAACTTTGCAGAACTAGCAG9862610CCTTGTCTTTTGGCTCTAGAACCTAAAGGTCGAGATGTGTTCCTTTCTTG
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141981.1:2598673-2598692
ATTTAATATTGAACTTCGCAGAACTAGCAG2598673CCTTGTCTTTTGGCTCTAGAACCCAAAAGCCGATACGTGTTCCTTCCTCA
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:31414684-31414703
GACGATTTGTGAACTTCGTAGTACTAGCAG31414684CCTTGTCTTTTGGCTCTAGAACCTGAAGGCCGAGAGTGTCCTTCCTCGGC
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:30896457-30896476
GACGATTTGTGAACTTCGTAGTACTAGCAG30896457CCTTGTCTTTTGGCTCTAGAACCTGAAGGCCGAGAATGTCCTTCCTCGGC
Malus domestica genome assembly, chromosome: 12.
OU696688.1:2612646-2612665
ATTTAATATTGAACTTCGCAGAACTAGCAG2612646CCTTGTCTTTTGGCTCTAGAACCCAAAAGCCGATACGTGTTCCTTCCTCA
Malus domestica genome assembly, chromosome: 12.
OU745002.1:2672271-2672290
ATTTAATATTGAACTTCGCAGAACTAGCAG2672271CCTTGTCTTTTGGCTCTAGAACCCAAAAGCCGATACGTGTTCCTTCCTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTAGAGCCAAAAGACAAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTAGAGCCAAAAGACAAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.090 | search_plus_done; http://172.18.8.135:50400/match?q=TCTAGAGCCAAAAGACAAGG&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGTCTTTTGGCTCTAGA&k=0&no_gap=0&offset=0&limit=47
0.120 | 0.004 | cgi_end;

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