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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-06 12:46:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:62784302-62784321
TATATTCTCTACACCTGCCTGAATAGATAC62784302TCTAGCATGTTTCTTTGCTGTCTTCTCTCTCTCTCTCTCTCTCTCTCTCT
Hibiscus tridactylites genome assembly, chromosome: 5.
OY288269.1:49705754-49705773
CATGATTTTTAAATCTGTTTTGAAAGCATA49705754TCTAGCATGTTTCTTTGCTGAGATTTTAAGCCATGTGTTGAAGGAAGCTC
Calliphora vomitoria genome assembly, chromosome: X.
OW818034.2:1754972-1754991
ATCAGGCTTGATTAAATTAAATTATCATAA1754972TCTAGCATGTTTCTTTGCTGTGCCCTCGAGTCTGAGGCTGACGTCCATAC
Amaurobius ferox genome assembly, chromosome: 14.
OX578149.1:125422787-125422806
CACAGTAACTGTATTCTAATTAAGTAATAT125422787TCTAGCATGTTTCTTTGCTGTTTTATTCATTCTAATATATAAAATATGTC
Danio kyathit genome assembly, chromosome: 24.
LR812542.1:35338047-35338066
ACATGCTACACCTTAGCAACACCTTTACAA35338047CAGCAAAGAAACATGCTAGAAACTACTTTAAACACCTTAGCAATACCATA
Lotus japonicus genomic DNA, chromosome 4, clone: LjB15O07, BM1698.
AP009629.1:53891-53910
AGAGAGAGAGAGAGAGAGAGAGAGAGAAGA53891CAGCAAAGAAACATGCTAGAGTATCTATTCAGGCAGGTGTAGAGAATATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTAGCATGTTTCTTTGCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTAGCATGTTTCTTTGCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.360 | 0.351 | search_plus_done; http://172.18.8.135:50400/match?q=TCTAGCATGTTTCTTTGCTG&k=0&no_gap=0&offset=0&limit=50
0.473 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=CAGCAAAGAAACATGCTAGA&k=0&no_gap=0&offset=0&limit=46
0.475 | 0.001 | cgi_end;

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