GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 00:48:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cannabis sativa PK15372.1_1.CasaPuKu mRNA sequence.
JP449235.1:108-127
CTATTCGGATTGAGCTAAAAGTTCAAACTT108TCTCAACTCTCATGGCTTGATCGATCAATCAATCAATCGATCGATCTACT
Brenthis daphne genome assembly, chromosome: 1.
OX352471.1:47490916-47490935
GCCCACCGAAGTGGGCCATCTCTCAGTGTG47490916TCTCAACTCTCATGGCTTGACGCTCGGCTGAATTGCGGGGAGCTAATTAA
Chionographis japonica genome assembly, chromosome: 2.
OX393550.1:31118115-31118134
TCTTATACGATCAATCTAGAACCCAATGCT31118115TCAAGCCATGAGAGTTGAGAAAAAAATTTACCAGGCTAAGGTTTGTTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCTCAACTCTCATGGCTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCAACTCTCATGGCTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCAACTCTCATGGCTTGA&k=0&no_gap=0&offset=0&limit=50
0.124 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAGCCATGAGAGTTGAGA&k=0&no_gap=0&offset=0&limit=48
0.125 | 0.001 | cgi_end;

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