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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:23:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

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NXSI_031_H05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA clone NXSI_031_H05 5' similar to Arabidopsis thaliana sequence At3g53750 actin (ACT3) see http://mips.gsf.de/proj/thal/db/index.html
BF517942.1:161-180
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT161TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
USDA-FP_123000-993 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-68_D08 5', mRNA sequence.
CF508490.1:168-187
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT168TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
RTCNT1_1_F07.g1_A029 Root control Pinus taeda cDNA clone RTCNT1_1_F07_A029 5', mRNA sequence.
CF663257.1:594-613
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT594TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
CGF1004278_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IF_G11 5', mRNA sequence.
CK933838.1:348-367
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT348TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
CGF1004564_A04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IIIF_A04 5', mRNA sequence.
CK935251.1:349-368
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT349TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
CGF1004390_D03 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IVF_D03 5', mRNA sequence.
CK935802.1:417-436
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT417TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
USDA-FP_10659 Rough Lemon seedling root Citrus jambhiri cDNA clone RLR04_C06 5', mRNA sequence.
CO912565.1:142-161
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT142TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
UCRCS04_2_016B10_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T3_B10, mRNA sequence.
CV885523.1:386-405
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT386TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
UCRCS04_2_026G11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_026_T3_G11, mRNA sequence.
CV887042.1:442-461
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT442TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
WS02619.BR_J11 WS-PP-N-A-12 Picea glauca cDNA clone WS02619_J11 5, mRNA sequence.
DR567687.1:366-385
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT366TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
EST1078239 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAC169 3' end, mRNA sequence.
DR688155.1:683-702
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT683TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
EST1149726 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMG985 3' end, mRNA sequence.
DT634795.1:692-711
CGAGTTGCCCCAGAGGGAGCATCCTGTTCT692TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
GQ0048.B3_M05 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0048_M05 5', mRNA sequence.
DV971069.2:310-329
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT310TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ0048.B3_O20 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0048_O20 5', mRNA sequence.
DV972566.2:383-402
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT383TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ0068.B3_O20 GQ006: Cambium and phloem from mature trees Picea glauca cDNA clone GQ0068_O20 5', mRNA sequence.
DV977550.2:394-413
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT394TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
KN0AAP13YH02FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY260734.1:390-409
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT390TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
GQ02901.B7_K15 GQ029 - Xylem scrapings - AT NITE Picea glauca cDNA clone GQ02901_K15 5', mRNA sequence.
EX330381.1:403-422
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT403TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ02903.B7_P23 GQ029 - Xylem scrapings - AT NITE Picea glauca cDNA clone GQ02903_P23 5', mRNA sequence.
EX331838.1:404-423
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT404TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ03012.B7_N20 GQ030 - Xylem planings - daytime and seasonal Picea glauca cDNA clone GQ03012_N20 5', mRNA sequence.
EX341925.1:236-255
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT236TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ03107.B7_C15 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03107_C15 5', mRNA sequence.
EX349206.1:403-422
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT403TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ03115.B7_P09 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03115_P09 5', mRNA sequence.
EX354949.1:362-381
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT362TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
GQ03124.B7_K16 GQ031 - Xylem Scrapings (Normalized library) Picea glauca cDNA clone GQ03124_K16 5', mRNA sequence.
EX358159.1:402-421
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT402TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
CS00-C1-650-002-F12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY679667.1:329-348
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT329TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
CS00-C2-003-003-G05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY684795.1:424-443
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT424TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CS00-C3-701-111-E01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY710062.1:384-403
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT384TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CS00-C3-701-111-G05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY710087.1:384-403
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT384TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CR05-C1-100-093-C03-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY765959.1:383-402
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT383TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CR05-C1-100-096-D09-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY766239.1:384-403
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT384TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CR05-C3-700-083-A08-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787095.1:436-455
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT436TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAGATGACAC
CR05-C3-700-080-H02-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787575.1:437-456
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT437TCTCACTGAGGCTCCCCTTAATCCGAAGGCCAATCGTGAGAAAGATGACA
CA26-C1-002-043-H12-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY844711.1:65-84
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT65TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
CA26-C1-002-040-F11-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY845214.1:64-83
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT64TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
CA26-C1-002-100-B03-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY850409.1:389-408
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT389TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
KN0AAP13YH02FM1 TF Citrus clementina cDNA clone KN0AAP13YH02, mRNA sequence.
FC926284.1:389-408
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT389TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
LV_HC_RA039C09r Litopenaeus vannamei hemocyte cDNA library Penaeus vannamei cDNA, mRNA sequence.
FE103241.1:370-389
CCGTGTTGCCCCTGAGGAGTCCCCCACACT370TCTCACTGAGGCTCCCCTTAACCCCAAGGCCAACCGTGAGAAGATGACTC
li0676934 Radiata pine juvenile latewood cDNA library Pinus radiata cDNA clone 39284 D11, mRNA sequence.
FE520648.1:398-417
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT398TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
li0677285 Radiata pine juvenile latewood cDNA library Pinus radiata cDNA clone 39151 C7, mRNA sequence.
FE520925.1:388-407
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT388TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
li0677488 Radiata pine juvenile latewood cDNA library Pinus radiata cDNA clone 40162 F8, mRNA sequence.
FE521083.1:400-419
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT400TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
li0675826 Radiata pine transition earlywood cDNA library Pinus radiata cDNA clone 34732 H4, mRNA sequence.
FE523186.1:424-443
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT424TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAGATGACAC
GQ0048.B3.r_B14 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clone GQ0048_B14 5', mRNA sequence.
GE474596.1:310-329
CCCAGTTGCCCCAGAGGAGCATCCTGTTCT310TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
PBA0126.C21_E24 Pba01-Bark-wounded-Norm (PBA01) Pinus banksiana cDNA clone PBA0126_E24 5', mRNA sequence.
GW755758.1:410-429
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT410TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAAAAAATGACAC
Picea glauca clone GQ02901_K15 mRNA sequence.
BT106031.1:403-422
CCGAGTTGCCCCAGAGGAGCATCCTGTTCT403TCTCACTGAGGCTCCCCTTAATCCCAAGGCAAACCGAGAGAAGATGACAC
Citrus maxima actin gene, complete cds.
GQ389668.1:413-432
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT413TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:6356116-6356135
TCGTGTGGCTCCGGAAGAGCATCCGGTTCT6356116TCTCACTGAGGCTCCCCTTAATCCAAAGGCCAATCGTGAGAAGATGACAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCACTGAGGCTCCCCTTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCACTGAGGCTCCCCTTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.514 | 2.505 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCACTGAGGCTCCCCTTA&k=0&no_gap=0&offset=0&limit=50
2.627 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=TAAGGGGAGCCTCAGTGAGA&k=0&no_gap=0&offset=0&limit=6
2.627 | 0.000 | cgi_end;

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