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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:56:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Meles meles genome assembly, chromosome: 5.
OV277445.1:54756999-54757019
CCCTCCTCCCTCCCTTCCCTCACTCCTCCC54756999TCTCATCCTTCCTCCCTTCTCCTCTCTCCCTCTCATCCTCTTCCCTCCCAT
Martes martes genome assembly, chromosome: 6.
OY734068.1:53072311-53072331
ACCCCTCCCTTCCCTTCCCTCACTCCTCCC53072311TCTCATCCTTCCTCCCTTCTCCTCTCTCCCTTTCATCCTCCCTCCTTTCTG
Martes martes genome assembly, chromosome: 6.
OY734068.1:114988798-114988818
CCTCCTCCCTCCTTCCCCTCACTCCCTCCC114988798TCTCATCCTTCCTCCCTTCTCCTCTCTCCCTTTCATCTTCCCTCCCTCTCT
Lateolabrax maculatus chromosome Lm8.
CP027269.1:14612424-14612444
GTGCATTTTTTTGGTCATATCCCGACTCCA14612424TCTCATCCTTCCTCCCTTCTCTCCATCTTAATCTGAGGCCAAACAGAACCG
KS17029B04 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078180.1:96-116
TTCGTTTCTTTTTCTTTTTTGTCTCCTTCC96TCTCATCCTTCCTCCCTTCTCTATTATTTATTTACCTCAAATTTCTCCATT
KS17060G07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD081161.1:37-57
TTCGTTTCTTTTTCTTTTTTGTCTCCTTCC37TCTCATCCTTCCTCCCTTCTCTATTATTTATTTACCTCAAATTTCTCCATT
KS20064C01 KS20 Capsicum annuum cDNA, mRNA sequence.
GD099184.1:96-116
TTCGTTTCTTTTTCTTTTTTGTCTCCTTCC96TCTCATCCTTCCTCCCTTCTCTATTATTTATTTACCTCAAATTTCTCCATT
HTZY005B18.F HTZY Panicum virgatum genomic 5', genomic survey sequence.
KO880815.1:905-925
TCCTCCTTTCTCCCTCTATCCTTCCCCCTC905TCTCATCCTTCCTCCCTTCTCCTCCTCCTCCCTCCCTTCTTCCTACTACCC
Peromyscus eremicus genome assembly, chromosome: X.
OX460417.1:14090441-14090461
AGGGAGGGGTTAGGAGAAAGGAGGGGGAAA14090441GAGAAGGGAGGAAGGATGAGAAGGGAGGGGGGATGAGAAGGGAGGGGGAAA
Peromyscus eremicus genome assembly, chromosome: X.
OX460489.1:19945616-19945636
AGGGAGGGGTTAGGAGAAAGGAGGGGGAAA19945616GAGAAGGGAGGAAGGATGAGAAGGGAGGGGGGATGAGAAGGGAGGGGGAAA
Peromyscus eremicus genome assembly, chromosome: X.
OX460489.1:19948762-19948782
AGAAAGGGTGGATGAGAAGGGAGGGGGAAA19948762GAGAAGGGAGGAAGGATGAGAAGGGAGGGGGAATGAGAAGGGAGTGGGAAA
Sarcophilus harrisii genome assembly, chromosome: 6.
LR735559.1:120477929-120477949
GGAAACTATTCTTTGCAAACTTTGAAATGA120477929GAGAAGGGAGGAAGGATGAGATTCTTATTCAGTGTCACTGTGGGAGAATTT
Lutra lutra genome assembly, chromosome: 6.
LR738408.1:35377075-35377095
TAGAGAGAGGGAGGAAGGATGAAAGGGAGA35377075GAGAAGGGAGGAAGGATGAGAGGGAGGGAGTGAGGGGAAGGAGGGAGGAGG
Lutra lutra genome assembly, chromosome: 6.
LR738408.1:99973596-99973616
ATGGGAGGGAGGAGGATGAGAGGGAGGAAG99973596GAGAAGGGAGGAAGGATGAGAGAGGGAGGAGTGAGGGGAGGGAGGGAGGAG
Meles meles genome assembly, chromosome: 5.
OV277445.1:54634299-54634319
AGAGATGGAGGGAGGATGAGAGGAAGGAAG54634299GAGAAGGGAGGAAGGATGAGAGGGAGGAGTGAGTGAAGGGAGGGAGGAGGG
Meles meles genome assembly, chromosome: 5.
OV277445.1:118779943-118779963
AGAGAGGGAGGGAGGATGAAAGGGAGAGAG118779943GAGAAGGGAGGAAGGATGAGAGGGAGGGAGTGAGGGGAAGGAGGGAGGAGG
Erinaceus europaeus genome assembly, chromosome: 11.
OX485821.1:60417003-60417023
TCTTTTGCTCTCTCTCTTTCTGCTGGGAAG60417003GAGAAGGGAGGAAGGATGAGAAGAAAGGAGAGAACCGTTAGTCTGAAAATT
Martes martes genome assembly, chromosome: 6.
OY734068.1:52896211-52896231
GGAGAGGGAGGGAGGATGAGAGGGAGGAAG52896211GAGAAGGGAGGAAGGATGAGAGGGAGGAGTGAGGGGAAGGAGGGAGGAGGG
Lateolabrax maculatus linkage group 16 genomic sequence, sequence.
CP032590.1:17522653-17522673
CGGTTCTGTTTGGCCTCAGATTAAGATGGA17522653GAGAAGGGAGGAAGGATGAGATGGAGTCGGGATATGACCAAAAAAATGCAC
BB170001A20H10.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170001A20H10 5', mRNA sequence.
BI509047.1:77-97
AGGGAAATGAATAAAAGTAAACAATGACAA77GAGAAGGGAGGAAGGATGAGAGAAGTTATCGAGACGATACGATTGAAGAGA
TSA: Capsicum annuum MGMT_Contig39417 mRNA sequence.
JW089661.1:762-782
AATGGAGAAATTTGAGGTAAATAAATAATA762GAGAAGGGAGGAAGGATGAGAGGAAGGAGACAAAAAAGAAAAAGAAACGAA
TSA: Capsicum annuum EJ_MegaContig_438, mRNA sequence.
JW128718.1:789-809
AATGGAGAAATTTGAGGTAAATAAATAATA789GAGAAGGGAGGAAGGATGAGAGGAAGGAGACAAAAAAGAAAAAGAAACGAA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:226732754-226732774
AATGGAGAAATTTGAGGTAAATAAATAATA226732754GAGAAGGGAGGAAGGATGAGAGGAAGGAGACAAAAAAGAAAAAGAAACGAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:231530874-231530894
AATGGAGAAATTTGAGGTAAATAAATAATA231530874GAGAAGGGAGGAAGGATGAGAGGAAGGAGACAAAAAAGAAAAAGAAACGAA
Canna indica chromosome 4.
CP136893.1:39860240-39860260
AAAGAAAGAAGCAACAATAGAAGAACAAAA39860240GAGAAGGGAGGAAGGATGAGAACACCAAAGATAGGATAAGAGGAAATGATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCATCCTTCCTCCCTTCTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCATCCTTCCTCCCTTCTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.588 | 0.580 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCATCCTTCCTCCCTTCTC&k=0&no_gap=0&offset=0&limit=50
0.754 | 0.166 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAAGGGAGGAAGGATGAGA&k=0&no_gap=0&offset=0&limit=42
0.765 | 0.011 | cgi_end;

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