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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-10 10:31:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus communis EST, clone L148.
AJ504930.1:17-38
CTACCCTTCACTTGGT17TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
CCPN3698.b1 CCPN Wrightia tinctoria developing embryos (L) Wrightia tinctoria cDNA clone CCPN3698 5', mRNA sequence.
HS560694.1:250-271
TATCCAGAAGGAATCCACCCTTCATCTTGT250TCTCCGACTCCGTGGTGGTATGCAGATCTTTGTTAAAACCCTTACCGGTAAG
CCPN3918.b1 CCPN Wrightia tinctoria developing embryos (L) Wrightia tinctoria cDNA clone CCPN3918 5', mRNA sequence.
HS561060.1:249-270
TATCCAGAAGGAATCCACCCTTCATCTTGT249TCTCCGACTCCGTGGTGGTATGCAGATGGTTGTTAAAACCCTTACCGGTAAG
Pyrus pyrifolia mRNA, clone: NFR1_24_86, 5' end sequence, expressed in fruit.
HX747698.1:171-192
CATCCAGAAGGAGTCTACCCTTCACTTGGT171TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR2_13_11, 5' end sequence, expressed in fruit.
HX749283.1:2-23
T2TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR2_13_15, 5' end sequence, expressed in fruit.
HX749287.1:2-23
T2TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR2_24_09, 5' end sequence, expressed in fruit.
HX750190.1:172-193
CATCCAGAAGGAGTCTACCCTTCACTTGGT172TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR3_20_89, 5' end sequence, expressed in fruit.
HX752876.1:587-608
CATCCAGAAGGAGTCTACCCTTCACTTGGT587TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR4_11_44, 5' end sequence, expressed in fruit.
HX754588.1:490-511
CATCCAGAAGGAGTCTACCCTTCACTTGGT490TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_18_08, 5' end sequence, expressed in fruit.
HX756595.1:285-306
CATCCAGAANNAGTCTACCCTTCACTTGGT285TCTCCGACTCCGTGGTGGTATGCAAATCTTCGT
Pyrus pyrifolia mRNA, clone: NFR5_18_09, 5' end sequence, expressed in fruit.
HX756596.1:625-646
CATCCAGAAGGAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_18_23, 5' end sequence, expressed in fruit.
HX756610.1:625-646
CATCCAGAANGAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGC
Pyrus pyrifolia mRNA, clone: NFR5_18_28, 5' end sequence, expressed in fruit.
HX756615.1:625-646
CATCCAGAANNAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGCNAATCTTCGTCANGA
Pyrus pyrifolia mRNA, clone: NFR5_18_72, 5' end sequence, expressed in fruit.
HX756653.1:625-646
CATCCAGAAGGAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_18_90, 5' end sequence, expressed in fruit.
HX756669.1:625-646
CATCCAGAAGGAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGCAAATC
Pyrus pyrifolia mRNA, clone: NFR5_42_05, 5' end sequence, expressed in fruit.
HX758434.1:625-646
CATCCAGAAGGAGTCTACCCTTCACTTGGT625TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_42_63, 5' end sequence, expressed in fruit.
HX758471.1:639-660
CATCCAGAAGGAGTCTACCCTTCACTTGGT639TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_42_65, 5' end sequence, expressed in fruit.
HX758473.1:639-660
CATCCAGAAGGAGTCTACCCTTCACTTGGT639TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR5_42_73, 5' end sequence, expressed in fruit.
HX758479.1:607-628
CATCCAGAAGGAGTCTACCCTTCACTTGGT607TCTCCGACTCCGTGGTGGTATGCAAATCTTCGT
Pyrus pyrifolia mRNA, clone: NFR6_10_36, 5' end sequence, expressed in fruit.
HX759652.1:28-49
CCAGAAGGAGTCTACCCTTCACTTGGT28TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR6_17_24, 5' end sequence, expressed in fruit.
HX760174.1:189-210
CATCCAGAAGGAGTCTACCCTTCACTTGGT189TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFW2_30_78, 5' end sequence, expressed in flower bud.
HX764404.1:235-256
CATCCAGAAGGAGTCTACCCTTCACTTGGT235TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFW3_06_45, 5' end sequence, expressed in flower.
HX765411.1:81-102
CATCCAGAAGGAGTCTACCCTTCACTTGGT81TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NLE1_06_60, 5' end sequence, expressed in leaf bud.
HX766251.1:30-51
ATCCAGAAGGAGTCTACCCTTCACTTGGT30TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NLE2_08_64, 5' end sequence, expressed in leaf.
HX767393.1:356-377
CATCCAGAAGGAGTCTACCCTTCACTTGGT356TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTC
Pyrus pyrifolia mRNA, clone: NLE2_13_58, 5' end sequence, expressed in leaf.
HX767771.1:245-266
CATCCAGAAGGAGTCTACCCTTCACTTGGT245TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NLE2_13_76, 5' end sequence, expressed in leaf.
HX767788.1:245-266
CATCCAGAAGGAGTCTACCCTTCACTTGGT245TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NLE2_32_82, 5' end sequence, expressed in leaf.
HX769350.1:384-405
CATCCAGAAGGAGTCTACCCTTCACTTGGT384TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NLE2_36_90, 5' end sequence, expressed in leaf.
HX769722.1:721-742
CATCCAGAAGGAGTCTACCCTTCACTTGGT721TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGANG
TSA: Pyrus pyrifolia mRNA, contig: contig_331.
FX395192.1:582-603
CATCCAGAAGGAGTCTACCCTTCACTTGGT582TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
TSA: Pyrus x bretschneideri Unigene9690_XinShao mRNA sequence.
JR604802.1:40-61
CATCCAGAAGGAGTCTACCCTTCACTTGGT40TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACAGGGAAG
Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:55081417-55081438
CATTCAGAAAGAGTCAACACTCCATCTGGT55081417TCTCCGACTCCGTGGTGGTATGCAGATTTTTGTCAAGACCTTGACAGGAAAG
Malassezia yamatoensis strain CBS 9725 chromosome 1.
CP119943.1:1439042-1439063
CATCCAGAAGGAGTCTACTCTTCATCTGGT1439042TCTCCGACTCCGTGGTGGTATGCAAGTCTTCGTCAAGACATTGACTGGCAAG
Malassezia yamatoensis strain CBS 9725 chromosome 1.
CP119943.1:1439270-1439291
CATCCAGAAGGAGTCTACTCTTCATCTGGT1439270TCTCCGACTCCGTGGTGGTATGCAAGTCTTCGTCAAGACATTGACTGGCAAG
Malassezia yamatoensis strain CBS 9725 chromosome 1.
CP119943.1:1439498-1439519
CATCCAGAAGGAGTCTACTCTTCATCTGGT1439498TCTCCGACTCCGTGGTGGTATGCAAGTCTTCGTCAAGACATTGACTGGCAAG
Malassezia yamatoensis strain CBS 9725 chromosome 1.
CP119943.1:1439726-1439747
CATCCAGAAGGAGTCTACTCTTCATCTGGT1439726TCTCCGACTCCGTGGTGGTATGCAAGTCTTCGTCAAGACATTGACTGGCAAG
Malassezia yamatoensis strain CBS 9725 chromosome 1.
CP119943.1:1439954-1439975
CATCCAGAAGGAGTCTACTCTTCATCTGGT1439954TCTCCGACTCCGTGGTGGTATGCAAGTCTTCGTCAAGACATTGACTGGCAAG
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:52905316-52905337
CATTCAGAAAGAGTCAACACTCCATCTGGT52905316TCTCCGACTCCGTGGTGGTATGCAGATTTTTGTCAAGACCTTGACAGGAAAG
Neonectria neomacrospora isolate KNNDK1 genome assembly, chromosome: 5.
OU830642.1:1554121-1554142
CATCCAGAAGGAGTCTACTCTTCACTTGGT1554121TCTCCGACTCCGTGGTGGTATGCAGATTTTCGTCAAGACCTTGACCGGAAAG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:29255000-29255021
CATCCAGAAGGAGTCTACCCTTCACTTGGT29255000TCTCCGACTCCGTGGTGGTATGCAAATCTTCGTCAAGACCCTTACCGGGAAG
Pyrus pyrifolia mRNA, clone: NFR1_10_66, 3' end sequence, expressed in fruit.
HX739236.1:314-335
CTTCCCGGTAAGGGTCTTGACGAAGATTTG314CATACCACCACGGAGTCGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATG
TSA: Musa acuminata AAA Group Unigene78766_NK1 mRNA sequence.
JV392136.1:266-287
CTTTCCCGTCAGGGTCTTGACGAAGATCTG266CATACCACCACGGAGTCGGAGAACCAAGTGCAAGGTGCTCTCCTTTTGAATG
Calonectria ilicicola strain GDYJ169 chromosome 5.
CP085829.1:5235619-5235640
CTTTCCAGTCAGAGTCTTGACAAAGATTTG5235619CATACCACCACGGAGTCGGAGAACGAGATGCAGAGTAGATTCCTTCTGAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCTCCGACTCCGTGGTGGTATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCTCCGACTCCGTGGTGGTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
5.222 | 5.213 | search_plus_done; http://172.18.8.135:50400/match?q=TCTCCGACTCCGTGGTGGTATG&k=0&no_gap=0&offset=0&limit=50
5.539 | 0.317 | search_minus_done; http://172.18.8.135:50400/match?q=CATACCACCACGGAGTCGGAGA&k=0&no_gap=0&offset=0&limit=10
5.541 | 0.002 | cgi_end;

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